RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 IGHV5-10-1A0A0J9YXX1 117 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 PDZK1P1A8MUH7 402 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 LDB2O43679 373 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 POP7O75817 140 aaKnown RBP16.77■□□□□ 0.28
COMMD3-210ENST00000472610 GAS8O95995 478 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 VIPP01282 170 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 RALBP11234 206 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 ITPKBP27987 946 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 AKT1P31749 480 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 ZNF140P52738 457 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-210ENST00000472610 XIAPP98170 497 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 DMPKQ09013 629 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 CCNG2Q16589 344 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 GPR33Q49SQ1 333 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 BROXQ5VW32 411 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 TMEM220Q6QAJ8 160 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 WDR74Q6RFH5 385 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-210ENST00000472610 TRIM48Q8IWZ4 208 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 SPACA3Q8IXA5 215 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 OR13C4Q8NGS5 318 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 C1orf54Q8WWF1 131 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 B3GNT4Q9C0J1 378 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 DRG1Q9Y295 367 aaKnown RBP16.77■□□□□ 0.28
COMMD3-210ENST00000472610 SLC30A1Q9Y6M5 507 aa16.77■□□□□ 0.28
COMMD3-210ENST00000472610 PMS2P1A4D2B8 440 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 GOLGA6L3A6NEY3 463 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 LILRA5A6NI73 299 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 H7C0S8 307 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 NVLO15381 856 aaKnown RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 GPR39O43194 453 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 IFNB1P01574 187 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 HOXB3P14651 431 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 ITGALP20701 1170 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 SLC19A1P41440 591 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 HALP42357 657 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 UBE2IP63279 158 aaKnown RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 SNX1Q13596 522 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 LAMB3Q13751 1172 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 DRICH1Q6PGQ1 229 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 C4orf22Q6V702 233 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 SNX20Q7Z614 316 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 ZNF761Q86XN6 746 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 RBM12BQ8IXT5 1001 aaKnown RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 CCDC89Q8N998 374 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 STYXQ8WUJ0 223 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 DCUN1D1Q96GG9 259 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 CCDC74BQ96LY2 380 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 ETNK1Q9HBU6 452 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 POT1Q9NUX5 634 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 NLE1Q9NVX2 485 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 SCHIP1Q9P0W5 487 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 PAK5Q9P286 719 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 ZNF624Q9P2J8 865 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-210ENST00000472610 PDP2Q9P2J9 529 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 PISDQ9UG56 409 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 CRLS1Q9UJA2 301 aa16.76■□□□□ 0.27
COMMD3-210ENST00000472610 OR2AG2A6NM03 316 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 E7EVH7 732 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 THRAP10827 490 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 HGFP14210 728 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TPH1P17752 444 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 SLC5A2P31639 672 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 CSTF2P33240 577 aaKnown RBP eCLIP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 CA5AP35218 305 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 LMAN1P49257 510 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 CTSCP53634 463 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 UCNP55089 124 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TMPRSS15P98073 1019 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 CFHR1Q03591 330 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TLE3Q04726 772 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 CDH17Q12864 832 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 C16orf72Q14CZ0 275 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 FNBP1LQ5T0N5 605 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TMEM164Q5U3C3 297 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TMEM26Q6ZUK4 368 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 PDZD3Q86UT5 571 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 JAMLQ86YT9 394 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 TAB3Q8N5C8 712 aaPredicted RBP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 DNAAF3Q8N9W5 541 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 AGBL5Q8NDL9 886 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 NAF1Q96HR8 494 aaKnown RBP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 HOMER3Q9NSC5 361 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.75■□□□□ 0.27
COMMD3-210ENST00000472610 ACSL6Q9UKU0 697 aa16.75■□□□□ 0.27
COMMD3-210ENST00000472610 MGAT4DA6NG13 374 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 CFAP99D6REC4 459 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 KLK10O43240 276 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 CEP104O60308 925 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 SUN1O94901 812 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 FGGP02679 453 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 BRAFP15056 766 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 ITIH1P19827 911 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 MC4RP32245 332 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 CSF2RBP32927 897 aa16.74■□□□□ 0.27
COMMD3-210ENST00000472610 DRG2P55039 364 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms