RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ANKRD34CP0C6C1 535 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 SFTPCP11686 197 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 BRAFP15056 766 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 AMD1P17707 334 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 HLA-DPA1P20036 260 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 MAP4P27816 1152 aaKnown RBP22.16■■□□□ 1.14
C9orf3-213ENST00000471978 DRG2P55039 364 aaKnown RBP22.16■■□□□ 1.14
C9orf3-213ENST00000471978 CHRNA6Q15825 494 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 PPP2R5EQ16537 467 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 AGAP9Q5VTM2 703 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 FAM151BQ6UXP7 276 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 WASH2PQ6VEQ5 465 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 BBS12Q6ZW61 710 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 DAAM2Q86T65 1068 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 NLGN4XQ8N0W4 816 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 NLGN4YQ8NFZ3 816 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-213ENST00000471978 DTX3LQ8TDB6 740 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 C9orf72Q96LT7 481 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 TGM7Q96PF1 710 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 FAM117AQ9C073 453 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 SLC40A1Q9NP59 571 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 WASH6PQ9NQA3 447 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 POT1Q9NUX5 634 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 SPTA1P02549 2419 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 GLYATL1P3A0A0U1RQE8 302 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 H7C0C1 242 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 POLR1CO15160 346 aaPredicted RBP22.15■■□□□ 1.14
C9orf3-213ENST00000471978 BUD23O43709 281 aaKnown RBP22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A9O60656 530 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A6P19224 532 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A1P22309 533 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A4P22310 534 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 CYLC1P35663 651 aaPredicted RBP22.15■■□□□ 1.14
C9orf3-213ENST00000471978 ATP5OP48047 213 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 XRCC4Q13426 336 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 CCDC181Q5TID7 509 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 CXorf40BQ96DE9 158 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 FSD1LQ9BXM9 530 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 ZCCHC2Q9C0B9 1178 aaKnown RBP22.15■■□□□ 1.14
C9orf3-213ENST00000471978 C10orf88Q9H8K7 445 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A7Q9HAW7 530 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A10Q9HAW8 530 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 UGT1A8Q9HAW9 530 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 STARD5Q9NSY2 213 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 PKP3Q9Y446 797 aa22.15■■□□□ 1.14
C9orf3-213ENST00000471978 HEMK1Q9Y5R4 338 aaPredicted RBP22.15■■□□□ 1.14
C9orf3-213ENST00000471978 APOC4-APOC2K7ER74 178 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 CAPN5O15484 640 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 GPR39O43194 453 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 STK17BO94768 372 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 APOC2P02655 101 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 ITGB6P18564 788 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 RBL1P28749 1068 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 GPR18Q14330 331 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 CLCA4Q14CN2 919 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 LDLRAP1Q5SW96 308 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 TIPARPQ7Z3E1 657 aaKnown RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 PRICKLE2Q7Z3G6 844 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 RBM12BQ8IXT5 1001 aaKnown RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 RASGEF1AQ8N9B8 481 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 KIAA1143Q96AT1 154 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 GPN2Q9H9Y4 310 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 SIDT1Q9NXL6 827 aaKnown RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 WDR37Q9Y2I8 494 aa22.14■■□□□ 1.13
C9orf3-213ENST00000471978 TMEM184BQ9Y519 407 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-213ENST00000471978 BSNQ9UPA5 3926 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 KCNJ13O60928 360 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 PPFIA2O75334 1257 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 HALP42357 657 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 LEPRP48357 1165 aaKnown RBP22.13■■□□□ 1.13
C9orf3-213ENST00000471978 COPS2P61201 443 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 FOXM1Q08050 763 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 ITGA9Q13797 1035 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 BORAQ6PGQ7 559 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 AMZ2Q86W34 360 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 GBA3Q9H227 469 aa22.13■■□□□ 1.13
C9orf3-213ENST00000471978 TRIT1Q9H3H1 467 aaKnown RBP22.13■■□□□ 1.13
C9orf3-213ENST00000471978 LOC101059948A0A1B0GTJ6 334 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 ZNF891A8MT65 544 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-213ENST00000471978 PYCARD-AS1I3L0S3 204 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 GAPDHSO14556 408 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-213ENST00000471978 TOX3O15405 576 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-213ENST00000471978 POP7O75817 140 aaKnown RBP22.12■■□□□ 1.13
C9orf3-213ENST00000471978 RASSF9O75901 435 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 AGTP01019 485 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 CA5AP35218 305 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 CTNNA1P35221 906 aaKnown RBP22.12■■□□□ 1.13
C9orf3-213ENST00000471978 CAPZBP47756 277 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 SEPHS1P49903 392 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 CTSCP53634 463 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 GEMP55040 296 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 GPRC6AQ5T6X5 926 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 ITPRIPL1Q6GPH6 555 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 UNC5BQ8IZJ1 945 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 DDHD1Q8NEL9 900 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 RSC1A1Q92681 617 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 SLC45A3Q96JT2 553 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 FERMT1Q9BQL6 677 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 FICDQ9BVA6 458 aa22.12■■□□□ 1.13
C9orf3-213ENST00000471978 GEMIN8Q9NWZ8 242 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms