RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ZNF578Q96N58 590 aaPredicted RBP14.58□□□□□ -0.08
SSR4-208ENST00000471880 CMKLR1Q99788 373 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 TIMM29Q9BSF4 260 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
SSR4-208ENST00000471880 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 KLHL3Q9UH77 587 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 PSMD13Q9UNM6 376 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 AHCTF1Q8WYP5 2266 aa14.58□□□□□ -0.08
SSR4-208ENST00000471880 ZNF106Q9H2Y7 1883 aaKnown RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 IGSF10Q6WRI0 2623 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 IGHV1OR21-1A0A087WYE8 117 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 KIR2DS5A0A0G2JLQ3 304 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 A0A0G2JNG1 304 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 OR5K4A6NMS3 321 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 KIR2DS3K7RE56 304 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 POP7O75817 140 aaKnown RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 ZSCAN5DPP0CG00 497 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 ITIH1P19827 911 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CD1CP29017 333 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CCKBRP32239 447 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CA5AP35218 305 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 FDFT1P37268 417 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 FASLGP48023 281 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CTSCP53634 463 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 BASP1P80723 227 aaKnown RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 KIR2DS5Q14953 304 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 OASLQ15646 514 aaKnown RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 CCDC38Q502W7 563 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 DENND5AQ6IQ26 1287 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 ZNF438Q7Z4V0 828 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 AMZ2Q86W34 360 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 ZNF547Q8IVP9 402 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 BEND7Q8N7W2 519 aaPredicted RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 KCNE4Q8WWG9 221 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 ULK4Q96C45 1275 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 SGF29Q96ES7 293 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CRELD1Q96HD1 420 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 CCDC74BQ96LY2 380 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 TLR10Q9BXR5 811 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 TRMT1Q9NXH9 659 aaKnown RBP14.57□□□□□ -0.08
SSR4-208ENST00000471880 PAK5Q9P286 719 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 PCDHGA8Q9Y5G5 932 aa14.57□□□□□ -0.08
SSR4-208ENST00000471880 OR52A4PA6NMU1 304 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 GAPDHSO14556 408 aaPredicted RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 ZSCAN12O43309 604 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 APRTP07741 180 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 HOXB3P14651 431 aaPredicted RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 AMD1P17707 334 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 KCNJ1P48048 391 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 ZNF140P52738 457 aaPredicted RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 ERVPABLB-1P60509 514 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 GPLD1P80108 840 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 CDH17Q12864 832 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 EIF3IQ13347 325 aaKnown RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 CCNG2Q16589 344 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 BROXQ5VW32 411 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 KCTD11Q693B1 232 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 MICALCLQ6ZW33 695 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 FAM129CQ86XR2 697 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 AVL9Q8NBF6 648 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 SNIP1Q8TAD8 396 aaKnown RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 PRR11Q96HE9 360 aaPredicted RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 SLC46A1Q96NT5 459 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 COPS8Q99627 209 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 ARNT2Q9HBZ2 717 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 SARS2Q9NP81 518 aaKnown RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 TMEM9Q9P0T7 183 aa14.56□□□□□ -0.08
SSR4-208ENST00000471880 SCHIP1Q9P0W5 487 aaPredicted RBP14.56□□□□□ -0.08
SSR4-208ENST00000471880 IGHV5-10-1A0A0J9YXX1 117 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 KLK10O43240 276 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 LDB2O43679 373 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 POLBP06746 335 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 TYRP1P17643 537 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 CSF2RBP32927 897 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 CSTF2P33240 577 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSR4-208ENST00000471880 VPS41P49754 854 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 CLCNKAP51800 687 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 NFE2L1Q14494 772 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 NR1D2Q14995 579 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 C16orf72Q14CZ0 275 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 KCTD19Q17RG1 926 aaPredicted RBP14.55□□□□□ -0.08
SSR4-208ENST00000471880 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.55□□□□□ -0.08
SSR4-208ENST00000471880 SNX20Q7Z614 316 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 SLITRK4Q8IW52 837 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 GLIS1Q8NBF1 620 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 RTP4Q96DX8 246 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 ASCL3Q9NQ33 180 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 IMP3Q9NV31 184 aaKnown RBP14.55□□□□□ -0.08
SSR4-208ENST00000471880 SMOXQ9NWM0 555 aa14.55□□□□□ -0.08
SSR4-208ENST00000471880 A0A087WV48 116 aa14.54□□□□□ -0.08
SSR4-208ENST00000471880 A6NCN8 305 aa14.54□□□□□ -0.08
SSR4-208ENST00000471880 ERI2A8K979 691 aaKnown RBP14.54□□□□□ -0.08
SSR4-208ENST00000471880 DXOO77932 396 aaKnown RBP14.54□□□□□ -0.08
SSR4-208ENST00000471880 ITGA2BP08514 1039 aa14.54□□□□□ -0.08
SSR4-208ENST00000471880 PRSS56P0CW18 603 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms