RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 MAFAQ8NHW3 353 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 TRIB2Q92519 343 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PTGES2Q9H7Z7 377 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MRM3Q9HC36 420 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 PRDM8Q9NQV8 689 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PTGFRNQ9P2B2 879 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 NENFQ9UMX5 172 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 KCNK6Q9Y257 313 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RRP15Q9Y3B9 282 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 POLR3HQ9Y535 204 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 MYBPHLA2RUH7 354 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 STX16-NPEPL1H3BU86 382 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RFXANKO14593 260 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 STX16O14662 325 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RNGTTO60942 597 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 LDOC1O95751 146 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 PSMB9P28065 219 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 VIPR1P32241 457 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 LILRA4P59901 499 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RPS3AP61247 264 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 ATP6V0D1P61421 351 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 GALK2Q01415 458 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TMEM209Q96SK2 561 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CEP44Q9C0F1 390 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 BRF2Q9HAW0 419 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 KCNMB3Q9NPA1 279 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 DGKBQ9Y6T7 804 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 LINC00032P0C843 101 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PRKCHP24723 683 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 HSD17B2P37059 387 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 NAA20P61599 178 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 HNRNPKP61978 463 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD47-204ENST00000471694 CHAF1BQ13112 559 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CTBP1Q13363 440 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MAMLD1Q13495 774 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CCDC92Q53HC0 331 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 KLHL26Q53HC5 615 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MFSD5Q6N075 450 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 FOXR2Q6PJQ5 311 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TMPPEQ6ZT21 453 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 STYXQ8WUJ0 223 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 KCNK13Q9HB14 408 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 GLOD4Q9HC38 313 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CLN6Q9NWW5 311 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 APOBEC3BQ9UH17 382 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 SNX10Q9Y5X0 201 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 A0A1W2PP55 124 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 FAM86C2PA6NEL3 165 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PAPSS1O43252 624 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 OR5F1O95221 314 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 GJB5O95377 273 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 DLGAP3O95886 979 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 STATHP02808 62 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 SERPINE1P05121 402 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 YBEYP58557 167 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 RAB10P61026 200 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 SRYQ05066 204 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TLR1Q15399 786 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 GPR180Q86V85 440 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 ZNF100Q8IYN0 542 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CLEC1AQ8NC01 280 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 KIAA0895Q8NCT3 520 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RPLP0P6Q8NHW5 317 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 SMARCD2Q92925 531 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RNF157Q96PX1 679 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 RARRES3Q9UL19 164 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 IFT52Q9Y366 437 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 ZNF521Q96K83 1311 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 MRASO14807 208 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PXNP49023 591 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 HK2P52789 917 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CDC42P60953 191 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 RASA2Q15283 850 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PDZK1Q5T2W1 519 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 EMC10Q5UCC4 262 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 HFE2Q6ZVN8 426 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CMTM8Q8IZV2 173 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 BAP1Q92560 729 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 NIFKQ9BYG3 293 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 MAF1Q9H063 256 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CYP3A7-CYP3A51PA0A087WV96 503 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 EFCAB10A6NFE3 127 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 H7C0S8 307 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD47-204ENST00000471694 CYP3A7P24462 503 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 CDH13P55290 713 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PPP3CAQ08209 521 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TMPRSS9Q7Z410 1059 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 SATL1Q86VE3 508 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 HORMAD2Q8N7B1 307 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TEKT5Q96M29 485 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 WDR77Q9BQA1 342 aaPredicted RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 BDH2Q9BUT1 245 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms