RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NCKIPSDQ9NZQ3 722 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 IL36AQ9UHA7 158 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 TSPAN11A1L157 253 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 NPHS1O60500 1241 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 LILRB5O75023 590 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 LYPLA1O75608 230 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ZNF30P17039 623 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 TFEBP19484 476 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SCTRP47872 440 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 NAGLUP54802 743 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 AQP5P55064 265 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ACTN3Q08043 901 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SIM2Q14190 667 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 RCN2Q14257 317 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 E2F5Q15329 346 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 C9orf64Q5T6V5 341 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 FAM151BQ6UXP7 276 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ISCA2Q86U28 154 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SERPINA9Q86WD7 417 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 RBFAQ8N0V3 343 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CNDP1Q96KN2 507 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 DERL2Q9GZP9 239 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 RAD18Q9NS91 495 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 HEY2Q9UBP5 337 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 TRMT6Q9UJA5 497 aaKnown RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SLC12A4Q9UP95 1085 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 WASF2Q9Y6W5 498 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 EML5Q05BV3 1969 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ABCA7Q8IZY2 2146 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ANKRD65E5RJM6 399 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 FSBPO95073 299 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 KITP10721 976 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CD1DP15813 335 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 BCKDHBP21953 392 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ARHGEF7Q14155 803 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ZNF805Q5CZA5 627 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ARSIQ5FYB1 569 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CFAP157Q5JU67 520 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 NAPRTQ6XQN6 538 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
HSPG2-208ENST00000471322 OR2T3Q8NH03 318 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ERP27Q96DN0 273 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SIPA1Q96FS4 1042 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 PLEKHG4BQ96PX9 1271 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CLPBQ9H078 707 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 P2RY12Q9H244 342 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SAR1AQ9NR31 198 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 SUN2Q9UH99 717 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 CYP8B1Q9UNU6 501 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 RAP2CQ9Y3L5 183 aa17.29■□□□□ 0.36
HSPG2-208ENST00000471322 GON4LQ3T8J9 2241 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 CKAP5Q14008 2032 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 FANCMQ8IYD8 2048 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 CCDC163A0A0D9SF12 145 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 A0A0U1RQS6 177 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 E5RI56 91 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 SLCO1B7G3V0H7 640 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 GAPDHSO14556 408 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 CCDC22O60826 627 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 SMIM24O75264 130 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 LEFTY1O75610 366 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 IPO13O94829 963 aaKnown RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 TPBGLP0DKB5 382 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 ALOX15P16050 662 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 VIPR1P32241 457 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 PTSQ03393 145 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 POM121L1PQ3SYA9 428 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 TSPAN33Q86UF1 283 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 KBTBD6Q86V97 674 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 MMAAQ8IVH4 418 aaKnown RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 KIRREL3Q8IZU9 778 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 DEFB119Q8N690 84 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 FAM122AQ96E09 287 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 ALG9Q9H6U8 611 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 TXLNGQ9NUQ3 528 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 PKD2L2Q9NZM6 624 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 B4GALT6Q9UBX8 382 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 MARCOQ9UEW3 520 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 CRLS1Q9UJA2 301 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 HAO1Q9UJM8 370 aa17.28■□□□□ 0.36
HSPG2-208ENST00000471322 APOBEC2Q9Y235 224 aaKnown RBP17.28■□□□□ 0.36
HSPG2-208ENST00000471322 PIEZO1Q92508 2521 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 EDDM13A0A1B0GTR0 161 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 RGSL1A5PLK6 1076 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 UPK3BL1B0FP48 263 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 UPK3BL2E5RIL1 263 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 OR1I1O60431 355 aa17.27■□□□□ 0.36
HSPG2-208ENST00000471322 PRNPP04156 253 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms