RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SORDQ00796 357 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 PDE1BQ01064 536 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 GALNT2Q10471 571 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 PTP4A2Q12974 167 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 SLC9B1Q4ZJI4 515 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 QSOX2Q6ZRP7 698 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 SLC46A3Q7Z3Q1 461 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 SLC9B2Q86UD5 537 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 DMBX1Q8NFW5 382 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 LRRC8CQ8TDW0 803 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 KIF1BPQ96EK5 621 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 TKTL2Q9H0I9 626 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 CSTL1Q9H114 145 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 CHMP4BQ9H444 224 aaKnown RBP5.37□□□□□ -1.55
CCDC39-202ENST00000471307 SLC13A4Q9UKG4 626 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 AAR2Q9Y312 384 aaKnown RBP5.37□□□□□ -1.55
CCDC39-202ENST00000471307 PAPPAQ13219 1627 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 DOT1LQ8TEK3 1739 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 SBF2Q86WG5 1849 aa5.37□□□□□ -1.55
CCDC39-202ENST00000471307 LRRC53A6NM62 1247 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 TCERG1O14776 1098 aaKnown RBP5.36□□□□□ -1.55
CCDC39-202ENST00000471307 CAPN9O14815 690 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 DDX58O95786 925 aaKnown RBP5.36□□□□□ -1.55
CCDC39-202ENST00000471307 FTCDO95954 541 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 CGAP01215 116 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 CPOXP36551 454 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 FMO5P49326 533 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 TERF1P54274 439 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 GSTA3Q16772 222 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 CEP85LQ5SZL2 805 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 ZNF34Q8IZ26 560 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 OR2AK2Q8NG84 335 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 NFKBIDQ8NI38 313 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 BBS10Q8TAM1 723 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 HVCN1Q96D96 273 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 FBXO17Q96EF6 278 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 MPHOSPH8Q99549 860 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 LUZP4Q9P127 313 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 BCCIPQ9P287 314 aaKnown RBP eCLIP5.36□□□□□ -1.55
CCDC39-202ENST00000471307 RALYQ9UKM9 306 aaKnown RBP5.36□□□□□ -1.55
CCDC39-202ENST00000471307 SARDHQ9UL12 918 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 CEPT1Q9Y6K0 416 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 KCPQ6ZWJ8 1503 aa5.36□□□□□ -1.55
CCDC39-202ENST00000471307 GREB1LQ9C091 1923 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 ZNF831Q5JPB2 1677 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 NHSQ6T4R5 1651 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 PALLDQ8WX93 1383 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CCDC189A1A4V9 331 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 LDLRAD4O15165 306 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 NCAM2O15394 837 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 SLC22A3O75751 556 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 ITGA2P17301 1181 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 PAFAH1B1P43034 410 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 PPM1FP49593 454 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 HOXA1P49639 335 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CLCN3P51790 818 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 HILS1P60008 231 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CSNK2A1P68400 391 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 GAGE5Q13069 117 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 GAGE6Q13070 117 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CCNYL2Q5T2Q4 361 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 COPS6Q7L5N1 327 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 G2E3Q7L622 706 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CACNA2D4Q7Z3S7 1137 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 CSNK2A3Q8NEV1 391 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 DUSP19Q8WTR2 217 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 PABPC5Q96DU9 382 aaKnown RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 SAAL1Q96ER3 474 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 MTERF1Q99551 399 aaKnown RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 SYT17Q9BSW7 474 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 ASAH2Q9NR71 780 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 RRN3Q9NYV6 651 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 GGA3Q9NZ52 723 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 DDX19BQ9UMR2 479 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 GAB2Q9UQC2 676 aa5.35□□□□□ -1.55
CCDC39-202ENST00000471307 LRRFIP2Q9Y608 721 aaKnown RBP5.35□□□□□ -1.55
CCDC39-202ENST00000471307 BTAF1O14981 1849 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 RGS12O14924 1447 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 ABCC4O15439 1325 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PI4KAP2A4QPH2 592 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 WDR1O75083 606 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 MYL6BP14649 208 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 CORO1AP31146 461 aaKnown RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 TIMP3P35625 211 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 EIF3BP55884 814 aaKnown RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 IRX6P78412 446 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 FOXM1Q08050 763 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 ZNF234Q14588 700 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 DRAP1Q14919 205 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PDSS1Q5T2R2 415 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PLA2G4FQ68DD2 849 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 INO80CQ6PI98 192 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 BRAT1Q6PJG6 821 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PQLC2Q6ZP29 291 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 SLC26A9Q7LBE3 791 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 CPXCR1Q8N123 301 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms