RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ADIPOQQ15848 244 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 LPAL2Q16609 132 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ZFP69Q49AA0 526 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SOWAHCQ53LP3 525 aaPredicted RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ASPRV1Q53RT3 343 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 LRIF1Q5T3J3 769 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 NDUFAF5Q5TEU4 345 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MFSD6Q6ZSS7 791 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SH2D5Q6ZV89 423 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CCDC190Q86UF4 302 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SMAP1Q8IYB5 467 aaPredicted RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 DIS3L2Q8IYB7 885 aaKnown RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 RNF168Q8IYW5 571 aaPredicted RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF843Q8N446 348 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SLC5A8Q8N695 610 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 GCSAMQ8N6F7 178 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 EMC1Q8N766 993 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 PAF1Q8N7H5 531 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 TSPYL6Q8N831 410 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 FRMD1Q8N878 549 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SLC38A9Q8NBW4 561 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MAPK1IP1LQ8NDC0 245 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 DBF4BQ8NFT6 615 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 RDM1Q8NG50 284 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ETNPPLQ8TBG4 499 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 KCNG4Q8TDN1 519 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 TRPC4APQ8TEL6 797 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ART5Q96L15 291 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 PRMT6Q96LA8 375 aaPredicted RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF599Q96NL3 588 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 WDFY2Q96P53 400 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SEMA3CQ99985 751 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 PDZD7Q9H5P4 517 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 JMJD4Q9H9V9 463 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ZBTB20Q9HC78 741 aaPredicted RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 EPB41L5Q9HCM4 733 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 PREBQ9HCU5 417 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SIX2Q9NPC8 291 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SLC38A7Q9NVC3 462 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 C2orf42Q9NWW7 574 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CACNG5Q9UF02 275 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 R3HDM2Q9Y2K5 976 aaKnown RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 KCNE2Q9Y6J6 123 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 A0A1B0GVC2 190 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 FAM237BA0A1B0GVD1 139 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 A6NL46 340 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 MAGEB17A8MXT2 336 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PLK4O00444 970 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 NR5A2O00482 541 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PSMD14O00487 310 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SMAD9O15198 467 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SLC22A2O15244 555 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 OGG1O15527 345 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF217O75362 1048 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF821O75541 412 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 DAB1O75553 588 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 EIF3JO75822 258 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 RTN3O95197 1032 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 CCNDBP1O95273 360 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 BMP10O95393 424 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 CLPTM1O96005 669 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TFAP2AP05549 437 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 LIFP15018 202 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ACADLP28330 430 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PIK3CAP42336 1068 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 GPR143P51810 404 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 CASP6P55212 293 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 CD81P60033 236 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 RPS3AP61247 264 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 IRX1P78414 480 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TFAP4Q01664 338 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 MFAP5Q13361 173 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ITGA9Q13797 1035 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 NAB2Q15742 525 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TSTQ16762 297 aaKnown RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 DUOXA1Q1HG43 343 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PCGF3Q3KNV8 242 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 KIAA1644Q3SXP7 199 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 FFAR4Q5NUL3 377 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ACSM2BQ68CK6 577 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 GLDNQ6ZMI3 551 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ISCA2Q86U28 154 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 TSPAN33Q86UF1 283 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 PTOV1Q86YD1 416 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 GALNT13Q8IUC8 556 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ARHGAP12Q8IWW6 846 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 OR2T12Q8NG77 320 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 OR8K5Q8NH50 307 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 HCAR2Q8TDS4 363 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 MORC4Q8TE76 937 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SMPDL3BQ92485 455 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SGCDQ92629 289 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ZKSCAN4Q969J2 545 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF689Q96CS4 500 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 ELMOD3Q96FG2 381 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SLC47A1Q96FL8 570 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 C1orf74Q96LT6 269 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 GFI1Q99684 422 aa1.31□□□□□ -2.2
UBXN4-207ENST00000471246 SEPT5Q99719 369 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-207ENST00000471246 OPRPNQ99935 248 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms