RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RAD51CO43502 376 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SEC31AO94979 1220 aaKnown RBP19.44■□□□□ 0.7
HDAC7-220ENST00000471235 TUBB4AP04350 444 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 RALBP11234 206 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 PBLDP30039 288 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-220ENST00000471235 CLDN6P56747 220 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SEMA3AQ14563 771 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 ITIH4Q14624 930 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 MORF4L2Q15014 288 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 CASC4Q6P4E1 433 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 BEND7Q8N7W2 519 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-220ENST00000471235 OR4L1Q8NH43 312 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SGF29Q96ES7 293 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SNF8Q96H20 258 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SGSM3Q96HU1 749 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 ZNF514Q96K75 400 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-220ENST00000471235 SAMD15Q9P1V8 674 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 RABGEF1Q9UJ41 708 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 RNF215Q9Y6U7 377 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 NCOR2Q9Y618 2525 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 KIF26BQ2KJY2 2108 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 SDR42E2A6NKP2 422 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 EFCAB8A8MWE9 144 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 SNX2O60749 519 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 ATP1B2P14415 290 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 ARNTP27540 789 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 RPL21P46778 160 aaKnown RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 PRLHRP49683 370 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 ITGA8P53708 1063 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 DMPKQ09013 629 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 KIAA0930Q6ICG6 404 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 HIBCHQ6NVY1 386 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 PACS1Q6VY07 963 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 SLC37A2Q8TED4 501 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 ZNF669Q96BR6 464 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 SIGLEC10Q96LC7 697 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 CATSPERZQ9NTU4 200 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 MARCH4Q9P2E8 410 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-220ENST00000471235 MRFAP1Q9Y605 127 aa19.43■□□□□ 0.7
HDAC7-220ENST00000471235 FAM237BA0A1B0GVD1 139 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 POP7O75817 140 aaKnown RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 CDK4P11802 303 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 F3P13726 295 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 GLB1P16278 677 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 VCLP18206 1134 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 SPINK2P20155 84 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 INSM1Q01101 510 aaPredicted RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 SMAD1Q15797 465 aaKnown RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 FASTKD1Q53R41 847 aaKnown RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 HES3Q5TGS1 186 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 FAM83HQ6ZRV2 1179 aaPredicted RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 AMZ2Q86W34 360 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 SFRP1Q8N474 314 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 ARL14Q8N4G2 192 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 OR6C4Q8NGE1 309 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 MAPK15Q8TD08 544 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 CCDC3Q9BQI4 270 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 PRDM8Q9NQV8 689 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 KLK13Q9UKR3 277 aa19.42■□□□□ 0.7
HDAC7-220ENST00000471235 DNMT3AQ9Y6K1 912 aaPredicted RBP19.42■□□□□ 0.7
HDAC7-220ENST00000471235 CASC3O15234 703 aaKnown RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 TP73O15350 636 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 NUDT21O43809 227 aaKnown RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 OPA1O60313 960 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 BANF1O75531 89 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 VAPBO95292 243 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 E2F1Q01094 437 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 DHX9Q08211 1270 aaKnown RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 NFE2L1Q14494 772 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 SEPT7Q16181 437 aaKnown RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 MSS51Q4VC12 460 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 LYPLAL1Q5VWZ2 237 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 XKR5Q6UX68 686 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 CERS6Q6ZMG9 384 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 MAATS1Q7Z4T9 603 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 ZNF438Q7Z4V0 828 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 LDB1Q86U70 411 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 CLDN19Q8N6F1 224 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 STAMBPL1Q96FJ0 436 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 LINC00615Q96LM1 132 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 PWWP2AQ96N64 755 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 FCRL3Q96P31 734 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 SCHIP1Q9P0W5 487 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-220ENST00000471235 LRIT1Q9P2V4 623 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 SNX24Q9Y343 169 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 MAD1L1Q9Y6D9 718 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 PRSS21Q9Y6M0 314 aa19.41■□□□□ 0.7
HDAC7-220ENST00000471235 TRBV23OR9-2A0A075B6M9 112 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 MGAT4DA6NG13 374 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 PDZK1P1A8MUH7 402 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 SMAPO00193 183 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 CD3EAPO15446 510 aaKnown RBP19.4■□□□□ 0.7
HDAC7-220ENST00000471235 KCNJ13O60928 360 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 SLC2A4P14672 509 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 BRAFP15056 766 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 IDSP22304 550 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 NSG1P42857 185 aa19.4■□□□□ 0.7
HDAC7-220ENST00000471235 ARCN1P48444 511 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms