RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 KDELR3O43731 214 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 MFAP3LO75121 409 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 PALMO75781 387 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 NDUFA10O95299 355 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 CLDN14O95500 239 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 H2AFZP0C0S5 128 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 FAM228BP0C875 321 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 CCNB1P14635 433 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 DNASE1P24855 282 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 PTPN4P29074 926 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 MAN1A1P33908 653 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 PCK1P35558 622 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SPAM1P38567 509 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 GARSP41250 739 aaKnown RBP5.78□□□□□ -1.48
VARS-222ENST00000470953 NDST2P52849 883 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 CDH6P55285 790 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 KCNK10P57789 538 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 LLGL1Q15334 1064 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 ARTNQ5T4W7 220 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 HGSNATQ68CP4 663 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 ERAP2Q6P179 960 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SLC30A9Q6PML9 568 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 H2AFVQ71UI9 128 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TTC7BQ86TV6 843 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 PSTKQ8IV42 348 aaKnown RBP5.78□□□□□ -1.48
VARS-222ENST00000470953 VSTM4Q8IW00 320 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SIMC1Q8NDZ2 872 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 OR2AP1Q8NGE2 309 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 OR8K1Q8NGG5 319 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 KIAA1524Q8TCG1 905 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.78□□□□□ -1.48
VARS-222ENST00000470953 ADAMTS17Q8TE56 1095 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 CXorf40AQ8TE69 158 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 NCSTNQ92542 709 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 RAB7BQ96AH8 199 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 ISG20Q96AZ6 181 aaKnown RBP5.78□□□□□ -1.48
VARS-222ENST00000470953 PEBP4Q96S96 227 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 KCTD15Q96SI1 283 aaPredicted RBP5.78□□□□□ -1.48
VARS-222ENST00000470953 SYT11Q9BT88 431 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 C19orf24Q9BVV8 132 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TRIM7Q9C029 511 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 BRD8Q9H0E9 1235 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 LHX9Q9NQ69 397 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 ABHD10Q9NUJ1 306 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 GPR83Q9NYM4 423 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 LNPEPQ9UIQ6 1025 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SH3BGRL2Q9UJC5 107 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 MOSPD1Q9UJG1 213 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 PADI1Q9ULC6 663 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TTLL3Q9Y4R7 772 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SPTBP11277 2137 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 CXorf51AA0A1B0GTR3 108 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 SSU72P8A0A1W2PR75 194 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 PRSS38A1L453 326 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 AKR1B15C9JRZ8 316 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 BUB1BO60566 1050 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 TMEM63AO94886 807 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 POP4O95707 220 aaKnown RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 EML2O95834 649 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 IFNA2P01563 188 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 ERCC2P18074 760 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 LPOP22079 712 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 SERPINA4P29622 427 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 PPM1FP49593 454 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 PAPOLAP51003 745 aaKnown RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 DGKQP52824 942 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 GFERP55789 205 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 KIAA1024LP59773 190 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 GPLD1P80108 840 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 DEFA6Q01524 100 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 BIRC2Q13490 618 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 GRM3Q14832 879 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 SPA17Q15506 151 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 SLC18A3Q16572 532 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 CA9Q16790 459 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 LONRF1Q17RB8 773 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 BOLA3Q53S33 107 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 LCN10Q6JVE6 187 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 WDR74Q6RFH5 385 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 GDPD4Q6W3E5 623 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 NCCRP1Q6ZVX7 275 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 RASGRP3Q8IV61 690 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 MAP7D3Q8IWC1 876 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 UMODL1-AS1Q8N2C9 162 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 LZTR1Q8N653 840 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 NETO2Q8NC67 525 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 KCTD6Q8NC69 237 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 ACRBPQ8NEB7 543 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 TEKT4Q8WW24 435 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 AHCYL2Q96HN2 611 aaKnown RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 LCORQ96JN0 433 aaPredicted RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 BTBD6Q96KE9 485 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 OR6C1Q96RD1 312 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 DPYSL5Q9BPU6 564 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 MAGEB5Q9BZ81 275 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 ISCUQ9H1K1 167 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 ATP13A3Q9H7F0 1226 aa5.77□□□□□ -1.49
VARS-222ENST00000470953 CARS2Q9HA77 564 aaKnown RBP5.77□□□□□ -1.49
VARS-222ENST00000470953 ZNF358Q9NW07 568 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms