RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	FAM172BP	A6NC97	362 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	ERVV-2	B6SEH9	535 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	PLK4	O00444	970 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	FGF17	O60258	216 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	SLC22A3	O75751	556 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	PLG	P00747	810 aa	Predicted RBP	5.18	□□□□□ -1.58
SSB-209	ENST00000470621	KRT19	P08727	400 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	ACTN1	P12814	892 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	DRG2	P55039	364 aa	Known RBP	5.18	□□□□□ -1.58
SSB-209	ENST00000470621	DLG2	Q15700	870 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF628	Q5EBL2	1059 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	PLXDC2	Q6UX71	529 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF534	Q76KX8	674 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	SLC26A9	Q7LBE3	791 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	SZRD1	Q7Z422	152 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	GBGT1	Q8N5D6	347 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	GCSAM	Q8N6F7	178 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	DDO	Q99489	341 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	EPYC	Q99645	322 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	GHITM	Q9H3K2	345 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	RAD21L1	Q9H4I0	556 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	DNAJC18	Q9H819	358 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	MBNL1	Q9NR56	388 aa	Known RBP	5.18	□□□□□ -1.58
SSB-209	ENST00000470621	TBC1D29	Q9UFV1	150 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	POLG2	Q9UHN1	485 aa		5.18	□□□□□ -1.58
SSB-209	ENST00000470621	DBNL	Q9UJU6	430 aa	Known RBP	5.18	□□□□□ -1.58
SSB-209	ENST00000470621	ZBTB43	O43298	467 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	IGHV4-39	P01824	125 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	SP1	P08047	785 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	HOXA13	P31271	388 aa	Predicted RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	MMP14	P50281	582 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	SUOX	P51687	545 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	MC1R	Q01726	317 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	HYAL1	Q12794	435 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	MEP1A	Q16819	746 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	ACCSL	Q4AC99	568 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	PLEKHM3	Q6ZWE6	761 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	C1orf52	Q8N6N3	182 aa	Known RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	FAM120B	Q96EK7	910 aa	Known RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	PGLYRP2	Q96PD5	576 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	HGH1	Q9BTY7	390 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	FKRP	Q9H9S5	495 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF334	Q9HCZ1	680 aa	Predicted RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	TXLNG	Q9NUQ3	528 aa		5.17	□□□□□ -1.58
SSB-209	ENST00000470621	TRMT1	Q9NXH9	659 aa	Known RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	ZNF215	Q9UL58	517 aa	Predicted RBP	5.17	□□□□□ -1.58
SSB-209	ENST00000470621	OR2M5	A3KFT3	312 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621		A6NCN8	305 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	CDRT15L2	A8MXV6	281 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	LINC01565	O15544	149 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	SYNGR3	O43761	229 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	SYNCRIP	O60506	623 aa	Known RBP	5.16	□□□□□ -1.58
SSB-209	ENST00000470621	GCNT3	O95395	438 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	MCC	P23508	829 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	NR2F2	P24468	414 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	PSMB10	P40306	273 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	CTSC	P53634	463 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	PHEX	P78562	749 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	CREB5	Q02930	508 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	MBTD1	Q05BQ5	628 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	DUSP28	Q4G0W2	176 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	TPRG1	Q6ZUI0	275 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	ANO5	Q75V66	913 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.16	□□□□□ -1.58
SSB-209	ENST00000470621	AACS	Q86V21	672 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	METTL27	Q8N6F8	245 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB-209	ENST00000470621	PPP4R1	Q8TF05	950 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	SLX1A	Q9BQ83	275 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	SMARCAD1	Q9H4L7	1026 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	TBC1D22B	Q9NU19	505 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	HAUS2	Q9NVX0	235 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	RCC2	Q9P258	522 aa	Known RBP	5.16	□□□□□ -1.58
SSB-209	ENST00000470621	PNMA2	Q9UL42	364 aa		5.16	□□□□□ -1.58
SSB-209	ENST00000470621	IGLV5-45	A0A087WSX0	123 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621		A0A0G2JNG1	304 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	CTSV	O60911	334 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	BAG4	O95429	457 aa	Known RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	LIPF	P07098	398 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	FGF5	P12034	268 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	MMP9	P14780	707 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	CSF2RA	P15509	400 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	NMBR	P28336	390 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	HOXD13	P35453	343 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	TIMP3	P35625	211 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	ACVR2B	Q13705	512 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	KIR2DS5	Q14953	304 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	MEA1	Q16626	185 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	RAB41	Q5JT25	222 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	HYI	Q5T013	277 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	ARID3B	Q8IVW6	561 aa	Predicted RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	KLHDC9	Q8NEP7	349 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	TREX2	Q9BQ50	279 aa	Predicted RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	SDF4	Q9BRK5	362 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	TFB2M	Q9H5Q4	396 aa	Known RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	SYNC	Q9H7C4	482 aa		5.15	□□□□□ -1.59
SSB-209	ENST00000470621	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	LAS1L	Q9Y4W2	734 aa	Known RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	5.15	□□□□□ -1.59
SSB-209	ENST00000470621	PRR23A	A6NEV1	266 aa		5.14	□□□□□ -1.59
SSB-209	ENST00000470621	ANKRD66	B4E2M5	251 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms