RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 HTR2BP41595 481 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ATP4BP51164 291 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ISL1P61371 349 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CDK5R2Q13319 367 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MXD4Q14582 209 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PCSK7Q16549 785 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 FSCN1Q16658 493 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TBRG1Q3YBR2 411 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SLX4IPQ5VYV7 408 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PKN3Q6P5Z2 889 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TTC39CQ8N584 583 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PARP16Q8N5Y8 322 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ANKK1Q8NFD2 765 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 JPH3Q8WXH2 748 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SEMA4BQ9NPR2 832 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SCN3BQ9NY72 215 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 STMN3Q9NZ72 180 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 C3orf18Q9UK00 162 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SNX10Q9Y5X0 201 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 AIREO43918 545 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TMCC2O75069 709 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ANXA6P08133 673 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MMP10P09238 476 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 IMPDH1P20839 514 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CHRNA4P43681 627 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SELPLGQ14242 412 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 UNC50Q53HI1 259 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 NOMO2Q5JPE7 1267 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TJAP1Q5JTD0 557 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF678Q5SXM1 525 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 AHSA2Q719I0 299 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SLC22A9Q8IVM8 553 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 NPWQ8N729 165 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 OR6P1Q8NGX9 317 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PABPC5Q96DU9 382 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 BTBD2Q9BX70 525 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MINDY3Q9H8M7 445 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 COMMD8Q9NX08 183 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 COQ3Q9NZJ6 369 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 RABL2AQ9UBK7 228 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 OPTCQ9UBM4 332 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 BTBD3Q9Y2F9 522 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SNX8Q9Y5X2 465 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CITO14578 2027 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 AREL1O15033 823 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CPNE3O75131 537 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 USP2O75604 605 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CDK14O94921 469 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MED26O95402 600 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 NDST3O95803 873 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MYL3P08590 195 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CYP2C18P33260 490 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 MASP1P48740 699 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CXCR3P49682 368 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CLCN3P51790 818 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 POU4F1Q01851 419 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PCID2Q5JVF3 399 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 PROSER1Q86XN7 944 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TP53I13Q8NBR0 393 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 IL17RDQ8NFM7 739 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TRIM63Q969Q1 353 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SNX18Q96RF0 628 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CARS2Q9HA77 564 aaKnown RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SDR39U1Q9NRG7 319 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ERVK13-1Q9NX77 482 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 EHD3Q9NZN3 535 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 LEF1Q9UJU2 399 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CRYL1Q9Y2S2 319 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 SHROOM3Q8TF72 1996 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 A0A1W2PQ72 361 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 ASPDHA6ND91 283 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 C12orf71A8MTZ7 269 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 DFFAO00273 331 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 NPM3O75607 178 aaKnown RBP9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 UBL4AP11441 157 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 GPLD1P80108 840 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 ADIGQ0VDE8 80 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 SOWAHCQ53LP3 525 aaPredicted RBP9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 KCTD11Q693B1 232 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 SDE2Q6IQ49 451 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 PTRH1Q86Y79 214 aaKnown RBP9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 BHMTQ93088 406 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 FAM162AQ96A26 154 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 YIPF6Q96EC8 236 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 KIF12Q96FN5 646 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 MAP6Q96JE9 813 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 CEP19Q96LK0 163 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 HBEGFQ99075 208 aa9.43□□□□□ -0.9
NHLRC3-203ENST00000470258 MYOCQ99972 504 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms