RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 KDELC1Q6UW63 502 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 C11orf96Q7Z7L8 435 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 TRAPPC5Q8IUR0 188 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 UNC5BQ8IZJ1 945 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 GDAP1Q8TB36 358 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 P3H4Q92791 437 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 CXorf40BQ96DE9 158 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 TGM7Q96PF1 710 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 VAT1Q99536 393 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 ZNF768Q9H5H4 540 aaKnown RBP17.19■□□□□ 0.34
COL7A1-208ENST00000470076 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
COL7A1-208ENST00000470076 PECAM1P16284 738 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-208ENST00000470076 STAT5AP42229 794 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 HALP42357 657 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 CAPZBP47756 277 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 HADHBP55084 474 aaKnown RBP17.18■□□□□ 0.34
COL7A1-208ENST00000470076 CDC20Q12834 499 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 IL11RAQ14626 422 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 CRTC2Q53ET0 693 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-208ENST00000470076 TFDP3Q5H9I0 405 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 SIRPB2Q5JXA9 342 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 KAZNQ674X7 775 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 SPOCD1Q6ZMY3 1216 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 TTC30BQ8N4P2 665 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 STARD8Q92502 1023 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 FCRL5Q96RD9 977 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 ULBP3Q9BZM4 244 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 ZCCHC2Q9C0B9 1178 aaKnown RBP17.18■□□□□ 0.34
COL7A1-208ENST00000470076 IL26Q9NPH9 171 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 KLHL8Q9P2G9 620 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-208ENST00000470076 FLNCQ14315 2725 aa17.18■□□□□ 0.34
COL7A1-208ENST00000470076 OR52A4PA6NMU1 304 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
COL7A1-208ENST00000470076 RASSF9O75901 435 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 SPAM1P38567 509 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
COL7A1-208ENST00000470076 SEPHS1P49903 392 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
COL7A1-208ENST00000470076 GPR18Q14330 331 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 NOMO1Q15155 1222 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 LDLRAP1Q5SW96 308 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 PID1Q7Z2X4 250 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 PRSS42Q7Z5A4 293 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 ZC3H18Q86VM9 953 aaKnown RBP17.17■□□□□ 0.34
COL7A1-208ENST00000470076 AMZ2Q86W34 360 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 RSC1A1Q92681 617 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 MRGPRX2Q96LB1 330 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 OR6C1Q96RD1 312 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 RAB33BQ9H082 229 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 IL17CQ9P0M4 197 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 EPHA6Q9UF33 1036 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 ALG6Q9Y672 507 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 RPS6KL1Q9Y6S9 549 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 MAST4O15021 2626 aa17.17■□□□□ 0.34
COL7A1-208ENST00000470076 ZRANB2O95218 330 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL7A1-208ENST00000470076 HLA-DPA1P20036 260 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 TCN2P20062 427 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 CHRNA4P43681 627 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 ADCY2Q08462 1091 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 DMPKQ09013 629 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 MPP3Q13368 585 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 ITGA9Q13797 1035 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 LLGL1Q15334 1064 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 SLC1A5Q15758 541 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 PPP2R5EQ16537 467 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 CYB5D1Q6P9G0 228 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 C6orf15Q6UXA7 325 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-208ENST00000470076 GLT6D1Q7Z4J2 308 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 KATNAL2Q8IYT4 538 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 RCOR2Q8IZ40 523 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 ZNF567Q8N184 647 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 SLC25A41Q8N5S1 370 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 DDHD1Q8NEL9 900 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 APOBEC4Q8WW27 367 aaKnown RBP17.16■□□□□ 0.34
COL7A1-208ENST00000470076 KLHL6Q8WZ60 621 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 OXNAD1Q96HP4 312 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-208ENST00000470076 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 TRIM10Q9UDY6 481 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 TRHDEQ9UKU6 1024 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 PKP3Q9Y446 797 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 DNMT3AQ9Y6K1 912 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-208ENST00000470076 PTPN13Q12923 2485 aa17.16■□□□□ 0.34
COL7A1-208ENST00000470076 hCG_1818297A0A087WSY0 165 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 GLYATL1P3A0A0U1RQE8 302 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 ZNF28P17035 718 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 OAS2P29728 719 aaKnown RBP17.15■□□□□ 0.34
COL7A1-208ENST00000470076 MAGEA1P43355 309 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 SH3BP2P78314 561 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 CHRNA6Q15825 494 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 CACHD1Q5VU97 1274 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 KLHL35Q6PF15 583 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 FAM151BQ6UXP7 276 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 PTRH1Q86Y79 214 aaKnown RBP17.15■□□□□ 0.34
COL7A1-208ENST00000470076 RASGRP3Q8IV61 690 aa17.15■□□□□ 0.34
COL7A1-208ENST00000470076 RASGEF1AQ8N9B8 481 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms