RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 GPR18Q14330 331 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 CHRNA6Q15825 494 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 SKOR2Q2VWA4 1001 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 DEFB109BQ30KR1 87 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ATP1A1-AS1Q5TC04 95 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 AGAP9Q5VTM2 703 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 WASH2PQ6VEQ5 465 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 FAM92BQ6ZTR7 304 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TRAPPC5Q8IUR0 188 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF567Q8N184 647 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TTC30BQ8N4P2 665 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 BLOC1S5Q8TDH9 187 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 CXorf40BQ96DE9 158 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 OXNAD1Q96HP4 312 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 MRGPRX2Q96LB1 330 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 CATSPER2Q96P56 530 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 OR6C1Q96RD1 312 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 EFHD1Q9BUP0 239 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ULBP3Q9BZM4 244 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TRIT1Q9H3H1 467 aaKnown RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 C10orf88Q9H8K7 445 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 WASH6PQ9NQA3 447 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 SIDT1Q9NXL6 827 aaKnown RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 KLHL8Q9P2G9 620 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 MRPS18BQ9Y676 258 aaKnown RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 MN1Q10571 1320 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TENM4Q6N022 2769 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-210ENST00000469897 GPR39O43194 453 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 VCLP18206 1134 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 F8A1P23610 371 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
CPSF4-210ENST00000469897 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-210ENST00000469897 GTF2H3Q13889 308 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 PTPRCAPQ14761 206 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 CACHD1Q5VU97 1274 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 TMEM220Q6QAJ8 160 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 C6orf15Q6UXA7 325 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-210ENST00000469897 FAM151BQ6UXP7 276 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 AMZ2Q86W34 360 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 RCOR2Q8IZ40 523 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 ESX1Q8N693 406 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 IPMKQ8NFU5 416 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 RSC1A1Q92681 617 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 ZDHHC12Q96GR4 267 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-210ENST00000469897 POT1Q9NUX5 634 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 IL17CQ9P0M4 197 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 PSMD13Q9UNM6 376 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 RPS6KL1Q9Y6S9 549 aa13.04□□□□□ -0.32
CPSF4-210ENST00000469897 PIEZO2Q9H5I5 2752 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 GLYATL1P3A0A0U1RQE8 302 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 MTSS1O43312 755 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 KCNJ13O60928 360 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 AGTP01019 485 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 TCN2P20062 427 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 SPAM1P38567 509 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 STAT5AP42229 794 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 HALP42357 657 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-210ENST00000469897 CTSCP53634 463 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 IL11RAQ14626 422 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 TFDP3Q5H9I0 405 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 IRGCQ6NXR0 463 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 FAM83HQ6ZRV2 1179 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-210ENST00000469897 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 CNGA4Q8IV77 575 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 CCDC50Q8IVM0 306 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 RBM12BQ8IXT5 1001 aaKnown RBP13.03□□□□□ -0.32
CPSF4-210ENST00000469897 GALNT6Q8NCL4 622 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 APOBEC4Q8WW27 367 aaKnown RBP13.03□□□□□ -0.32
CPSF4-210ENST00000469897 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 STARD8Q92502 1023 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
CPSF4-210ENST00000469897 UNC13CQ8NB66 2214 aa13.03□□□□□ -0.32
CPSF4-210ENST00000469897 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 OR2AG2A6NM03 316 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 ARHGAP6O43182 974 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 PSTPIP1O43586 416 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 KATNA1O75449 491 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 SPAG6O75602 509 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 KIAA0754O94854 1291 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 NDUFA10O95299 355 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 RBL1P28749 1068 aa13.02□□□□□ -0.33
CPSF4-210ENST00000469897 DLSTP36957 453 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms