RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FCHO1O14526 889 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 DGKAP23743 735 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 CTHP32929 405 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 P2RY2P41231 377 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 TNFRSF4P43489 277 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 ENPP2Q13822 863 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 UNC50Q53HI1 259 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 ACSBG2Q5FVE4 666 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 SH2D4BQ5SQS7 431 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 GPSM1Q86YR5 675 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 MYO1HQ8N1T3 1032 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 DTD2Q96FN9 168 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 PDLIM5Q96HC4 596 aaKnown RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 COQ10AQ96MF6 247 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 MBD1Q9UIS9 605 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 LRRC14BA6NHZ5 514 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 C2CD4DB7Z1M9 353 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 SPECC1L-ADORA2AF8WAN1 911 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 MATN2O00339 956 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 MAGEC1O60732 1142 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 MMP20O60882 483 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 SNUPNO95149 360 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 C6P13671 934 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 ATP1B2P14415 290 aaPredicted RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 TSPAN8P19075 237 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 KIR2DL1P43626 348 aaPredicted RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 ACTN3Q08043 901 aaPredicted RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 CNTN1Q12860 1018 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 KHDC1Q4VXA5 237 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 FBXO48Q5FWF7 155 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 FAM46CQ5VWP2 391 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 SEL1L3Q68CR1 1132 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 FRA10AC1Q70Z53 315 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 SUGP1Q8IWZ8 645 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 NRSN1Q8IZ57 195 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 MAPK15Q8TD08 544 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 PPP1R36Q96LQ0 422 aa17.89■□□□□ 0.45
SMC4-211ENST00000469858 EML4Q9HC35 981 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 UTP6Q9NYH9 597 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 APOBEC2Q9Y235 224 aaKnown RBP17.89■□□□□ 0.45
SMC4-211ENST00000469858 COL4A2P08572 1712 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 TRIOBPQ9H2D6 2365 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 TMEM233B4DJY2 109 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 CFAP99D6REC4 459 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 HDAC3O15379 428 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 RECQL5O94762 991 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 MSH3P20585 1137 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 TARSP26639 723 aaKnown RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 ALDH18A1P54886 795 aaKnown RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 TUBB3Q13509 450 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 TTLL9Q3SXZ7 439 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 ZNF648Q5T619 568 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 EPGNQ6UW88 154 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 DDHD1Q8NEL9 900 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 BTN2A2Q8WVV5 523 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 HDAC8Q9BY41 377 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 KCTD5Q9NXV2 234 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 CD274Q9NZQ7 290 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 ARMCX1Q9P291 453 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 FIS1Q9Y3D6 152 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 INPP4BO15327 924 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 MID1O15344 667 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 SYNCRIPO60506 623 aaKnown RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 EEF1DP29692 281 aaKnown RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 CCR7P32248 378 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 HK2P52789 917 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 HK3P52790 923 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 CDH13P55290 713 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 NCALDP61601 193 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 SATB1Q01826 763 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 CAMK2GQ13555 558 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 CST6Q15828 149 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 SLC9B1Q4ZJI4 515 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 C2orf27AQ580R0 203 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 ADAMTSL2Q86TH1 951 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 CUZD1Q86UP6 607 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 GLYATL1Q969I3 302 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 NUS1Q96E22 293 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 GAS2L1Q99501 681 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 TRMOQ9BU70 441 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 NUF2Q9BZD4 464 aa17.88■□□□□ 0.45
SMC4-211ENST00000469858 RSPH9Q9H1X1 276 aaPredicted RBP17.88■□□□□ 0.45
SMC4-211ENST00000469858 CCDC189A1A4V9 331 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 NPC1O15118 1278 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 GRID2O43424 1007 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 SNX2O60749 519 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 CCDC22O60826 627 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 RNASEH1O60930 286 aaKnown RBP17.87■□□□□ 0.45
SMC4-211ENST00000469858 CBX6O95503 412 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 TGFBIQ15582 683 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 PDCD2Q16342 344 aaPredicted RBP17.87■□□□□ 0.45
SMC4-211ENST00000469858 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 SBSNQ6UWP8 590 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 CYP2U1Q7Z449 544 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 NSUN5Q96P11 429 aaKnown RBP17.87■□□□□ 0.45
SMC4-211ENST00000469858 VPS35Q96QK1 796 aa17.87■□□□□ 0.45
SMC4-211ENST00000469858 TNFRSF12AQ9NP84 129 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms