RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ATP1B2P14415 290 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-209ENST00000469852 EPHA8P29322 1005 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-209ENST00000469852 RXRGP48443 463 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 TTPAP49638 278 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 MGAT5Q09328 741 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 ITIH4Q14624 930 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 AARS2Q5JTZ9 985 aaKnown RBP14.58□□□□□ -0.08
COL9A3-209ENST00000469852 CTSL3PQ5NE16 218 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 MRNIPQ6NTE8 343 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 XKR5Q6UX68 686 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 PACS1Q6VY07 963 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 CERS6Q6ZMG9 384 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 KANSL1Q7Z3B3 1105 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 NRROSQ86YC3 692 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 GATAD2AQ86YP4 633 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 GALNT13Q8IUC8 556 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 TRAPPC5Q8IUR0 188 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 C2CD4AQ8NCU7 369 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF548Q8NEK5 533 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-209ENST00000469852 LKAAEAR1Q8TD35 194 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 FBF1Q8TES7 1133 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 TTC25Q96NG3 672 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 OR2M4Q96R27 311 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 FAM167BQ9BTA0 163 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 EDEM2Q9BV94 578 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 P2RY12Q9H244 342 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 EPB41L4BQ9H329 900 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 DLL3Q9NYJ7 618 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 FBXO5Q9UKT4 447 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 GPSM3Q9Y4H4 160 aa14.58□□□□□ -0.08
COL9A3-209ENST00000469852 UBA6A0AVT1 1052 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 FAM159BA6NKW6 160 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 IQCF5A8MTL0 148 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 HAUS5O94927 633 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 GSTA2P09210 222 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 ACP5P13686 325 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 DGKAP23743 735 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 AK4P27144 223 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 PMLP29590 882 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 NSG1P42857 185 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CTBSQ01459 385 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 GTF2H3Q13889 308 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 PRRT3Q5FWE3 981 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 LYPLAL1Q5VWZ2 237 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF549Q6P9A3 640 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 IL27RAQ6UWB1 636 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CHST15Q7LFX5 561 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 DGLUCYQ7Z3D6 616 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 LRRTM4Q86VH4 590 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 SLC25A45Q8N413 288 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 LMX1AQ8TE12 382 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 SAP25Q8TEE9 199 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 AENQ8WTP8 325 aaKnown RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 BIRC8Q96P09 236 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 SLC13A1Q9BZW2 595 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 ZCCHC2Q9C0B9 1178 aaKnown RBP14.57□□□□□ -0.08
COL9A3-209ENST00000469852 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 RMI1Q9H9A7 625 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 GULP1Q9UBP9 304 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CRYL1Q9Y2S2 319 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CEP250Q9BV73 2442 aa14.57□□□□□ -0.08
COL9A3-209ENST00000469852 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 NDUFS3O75489 264 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 AHSGP02765 367 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 GIMD1P0DJR0 217 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 FMO4P31512 558 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 ARRB1P49407 418 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 PRLHRP49683 370 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 CCT8P50990 548 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 PMS2P54278 862 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 EIF3BP55884 814 aaKnown RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 HNRNPKP61978 463 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 PUM1Q14671 1186 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 SLMAPQ14BN4 828 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 KBTBD12Q3ZCT8 623 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 AASDHQ4L235 1098 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 BCL7AQ4VC05 210 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 FAM83HQ6ZRV2 1179 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 CEP128Q6ZU80 1094 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 SFTPA2Q8IWL1 248 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 LMNTD2Q8IXW0 634 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 KRT222Q8N1A0 295 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 OXR1Q8N573 874 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 LILRA3Q8N6C8 439 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 CALML6Q8TD86 181 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 HEXDCQ8WVB3 486 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 TCF12Q99081 682 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 DNAAF2Q9NVR5 837 aaKnown RBP14.56□□□□□ -0.08
COL9A3-209ENST00000469852 ZFATQ9P243 1243 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 FAM8A1Q9UBU6 413 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 RABGEF1Q9UJ41 708 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 RAB21Q9UL25 225 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 KCNK6Q9Y257 313 aa14.56□□□□□ -0.08
COL9A3-209ENST00000469852 PRR19A6NJB7 356 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms