RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 NEK2P51955 445 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RAC3P60763 192 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RHOAP61586 193 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ST8SIA6P61647 398 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PPP2CBP62714 309 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 VSNL1P62760 191 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PPP2CAP67775 309 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TUBB4BP68371 445 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ARF5P84085 180 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DSC2Q02487 901 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 HGFACQ04756 655 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 MTM1Q13496 603 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 OLIG2Q13516 323 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PON2Q15165 354 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DLG2Q15700 870 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GEN1Q17RS7 908 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PARP6Q2NL67 630 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ITPRIPL2Q3MIP1 535 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 FUT11Q495W5 492 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 MPP7Q5T2T1 576 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ATXN7L2Q5T6C5 722 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 EMC10Q5UCC4 262 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ANKRD22Q5VYY1 191 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 MBNL2Q5VZF2 373 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DENND2CQ68D51 928 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DUPD1Q68J44 220 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ITPRIPL1Q6GPH6 555 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RETSATQ6NUM9 610 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PPP1R21Q6ZMI0 780 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CCNI2Q6ZMN8 369 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TTLL10Q6ZVT0 673 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC25Q86WR0 208 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 LRRC49Q8IUZ0 686 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SFTPA1Q8IWL2 248 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC25A41Q8N5S1 370 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF366Q8N895 744 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PLA2G15Q8NCC3 412 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 IPMKQ8NFU5 416 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 OR6K2Q8NGY2 324 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 OR14K1Q8NGZ2 314 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SPATA22Q8NHS9 363 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 HDAC11Q96DB2 347 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CHFRQ96EP1 664 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ALG14Q96F25 216 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SNF8Q96H20 258 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TEKT5Q96M29 485 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SPATA13Q96N96 652 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TSGA13Q96PP4 275 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RBM15Q96T37 977 aaKnown RBP eCLIP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 APOL2Q9BQE5 337 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ACE2Q9BYF1 805 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 TM6SF2Q9BZW4 377 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 NEUROG2Q9H2A3 272 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 RETREG1Q9H6L5 497 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SEC61A2Q9H9S3 476 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GLOD4Q9HC38 313 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PCDH9Q9HC56 1237 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 GDF3Q9NR23 364 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 HEBP1Q9NRV9 189 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM114A2Q9NRY5 505 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PIH1D1Q9NWS0 290 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF212Q9UDV6 495 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 VPS51Q9UID3 782 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SLCO3A1Q9UIG8 710 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC25A13Q9UJS0 675 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 INTS6Q9UL03 887 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 CA14Q9ULX7 337 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 NFU1Q9UMS0 254 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 PLA2G4CQ9UP65 541 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 ERVW-1Q9UQF0 538 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM50BQ9Y247 325 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 OBSL1O75147 1896 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
TMEM39A-204ENST00000468545 A0A1W2PR48 441 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 TARSL2A2RTX5 802 aaKnown RBP4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 PMS2P1A4D2B8 440 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 GOLGA6CA6NDK9 693 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 GOLGA6BA6NDN3 693 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 TTC34A8MYJ7 566 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 WASH3PC4AMC7 463 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 PRRT4C9JH25 899 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 SPECC1L-ADORA2AF8WAN1 911 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 MUSKO15146 869 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 INSIG1O15503 277 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 PSMD3O43242 534 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 HOXC11O43248 304 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 CTIFO43310 598 aaKnown RBP4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 USP12O75317 370 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 AVILO75366 819 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 BANF1O75531 89 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 ZMPSTE24O75844 475 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 TMCC1O94876 653 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 KAT7O95251 611 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 CD160O95971 181 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 PEX11BO96011 259 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 MT-CYBP00156 380 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 AGTP01019 485 aa4.1□□□□□ -1.75
TMEM39A-204ENST00000468545 S100BP04271 92 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms