RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 COPS7BQ9H9Q2 264 aaPredicted RBP4.12□□□□□ -1.75
SMC4-208ENST00000467468 PLAC1Q9HBJ0 212 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 MMP25Q9NPA2 562 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 CHCHD3Q9NX63 227 aaKnown RBP4.12□□□□□ -1.75
SMC4-208ENST00000467468 TAS2R14Q9NYV8 317 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 WWOXQ9NZC7 414 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 WNT16Q9UBV4 365 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 SLC9A2Q9UBY0 812 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 STK39Q9UEW8 545 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 DBNLQ9UJU6 430 aaKnown RBP4.12□□□□□ -1.75
SMC4-208ENST00000467468 RCOR1Q9UKL0 485 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 TTC7AQ9ULT0 858 aaPredicted RBP4.12□□□□□ -1.75
SMC4-208ENST00000467468 FZD10Q9ULW2 581 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 MYO6Q9UM54 1294 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 PCDHA7Q9UN72 937 aa4.12□□□□□ -1.75
SMC4-208ENST00000467468 TMEM184BQ9Y519 407 aaPredicted RBP4.12□□□□□ -1.75
SMC4-208ENST00000467468 A0A087WV48 116 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 A0A0U1RQK1 487 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ZNF320A2RRD8 509 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 OR6C75A6NL08 312 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 H0YAE9 185 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 H0YIN7 160 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 STX6O43752 255 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ZWINTO95229 277 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 GOSR1O95249 250 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 CELF2O95319 508 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 PENKP01210 267 aaPredicted RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 ACHEP22303 614 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 GNLYP22749 145 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ARRB2P32121 409 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 SELENOVP59797 346 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 EGR4Q05215 589 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 PPP2R5CQ13362 524 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 PPIGQ13427 754 aaKnown RBP eCLIP4.11□□□□□ -1.752e-27■■■■■ 81.9
SMC4-208ENST00000467468 TUBB2AQ13885 445 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 KRT33BQ14525 404 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 MVPQ14764 893 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 TYSND1Q2T9J0 566 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 EIF2S3LQ2VIR3 472 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 MYLK3Q32MK0 819 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ATP13A5Q4VNC0 1218 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 FAM98BQ52LJ0 330 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 C6orf163Q5TEZ5 329 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 NSUN5P2Q63ZY6 315 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 LCN10Q6JVE6 187 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 TEX38Q6PEX7 206 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 TPRG1Q6ZUI0 275 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 MEPCEQ7L2J0 689 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 CCDC190Q86UF4 302 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 PALB2Q86YC2 1186 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 CCAR2Q8N163 923 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 CARNMT1Q8N4J0 409 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 AFAP1Q8N556 730 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 IQCF1Q8N6M8 205 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ENGASEQ8NFI3 743 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 B4GALNT2Q8NHY0 566 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 TAS1R2Q8TE23 839 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 OIT3Q8WWZ8 545 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 APBB2Q92870 758 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 NEK1Q96PY6 1258 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 GFM1Q96RP9 751 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 DDOQ99489 341 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 HAUS8Q9BT25 410 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ABHD6Q9BV23 337 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 TUBB2BQ9BVA1 445 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 DCLK3Q9C098 648 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 CNOT10Q9H9A5 744 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 DBNDD1Q9H9R9 158 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 CLK4Q9HAZ1 481 aaKnown RBP4.11□□□□□ -1.75
SMC4-208ENST00000467468 TMEM51Q9NW97 253 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 ZNF580Q9UK33 172 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 PCDHGA5Q9Y5G8 931 aa4.11□□□□□ -1.75
SMC4-208ENST00000467468 OR6C76A6NM76 312 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 EIF4E1BA6NMX2 242 aaKnown RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 ANXA2P2A6NMY6 339 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 SPRY3O43610 288 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 LDB2O43679 373 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 FMO6PO60774 539 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 PRAMEF11O60813 436 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 NGFRP08138 427 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 HOXC6P09630 235 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 G6PDP11413 515 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 PFKFB1P16118 471 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 CASTP20810 708 aaKnown RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 TCEA1P23193 301 aaKnown RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 HOXD3P31249 432 aaPredicted RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 HNRNPH1P31943 449 aaKnown RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 PCGF2P35227 344 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 PIGAP37287 484 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 EIF2S3P41091 472 aaKnown RBP4.1□□□□□ -1.75
SMC4-208ENST00000467468 FASLGP48023 281 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 BMXP51813 675 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 CAPZA1P52907 286 aa4.1□□□□□ -1.75
SMC4-208ENST00000467468 CSNK2A1P68400 391 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms