RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 A8MXE2 369 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 ZBTB43O43298 467 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PRPSAP2O60256 369 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TSC22D2O75157 780 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 GJB3O75712 270 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PALMO75781 387 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 KRT36O76013 467 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 CAMTA2O94983 1202 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PNPP00491 289 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 F9P00740 461 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 CYC1P08574 325 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 G6PDP11413 515 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 IL10P22301 178 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PPARGP37231 505 aaPredicted RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 GABRB2P47870 512 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TKTL1P51854 596 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 DLX5P56178 289 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 KLHL30Q0D2K2 578 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 CBX3Q13185 183 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 DCTN2Q13561 401 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 ZRSR1Q15695 479 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 CTF1Q16619 201 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PRICKLE4Q2TBC4 344 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SLC9B1Q4ZJI4 515 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SGO1Q5FBB7 561 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TOR1AIP1Q5JTV8 583 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 GARNL3Q5VVW2 1013 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 ANKRD54Q6NXT1 300 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 WDR73Q6P4I2 378 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 INO80CQ6PI98 192 aaPredicted RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 FBXO46Q6PJ61 603 aaPredicted RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 UNQ6126/PRO20091Q6UXV3 157 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 RUFY3Q7L099 469 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SLC46A3Q7Z3Q1 461 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PIWIL3Q7Z3Z3 882 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 PPP1R42Q7Z4L9 355 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 DZIP1Q86YF9 867 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 ZNF540Q8NDQ6 660 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 DENND6BQ8NEG7 585 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 HUS1BQ8NHY5 278 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SETD6Q8TBK2 473 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 METTL6Q8TCB7 284 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 DNASE2BQ8WZ79 361 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 POMGNT1Q8WZA1 660 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TANKQ92844 425 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 ARHGEF2Q92974 986 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 SYAP1Q96A49 352 aaPredicted RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 VPS33AQ96AX1 596 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 RMDN1Q96DB5 314 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TMEM19Q96HH6 336 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TMEM237Q96Q45 408 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SPXQ9BT56 116 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 H2AFJQ9BTM1 129 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 FUT8Q9BYC5 575 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 SLC25A18Q9H1K4 315 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 EBF2Q9HAK2 575 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 PDE7BQ9NP56 450 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 COQ3Q9NZJ6 369 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 C1RLQ9NZP8 487 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 CACNG4Q9UBN1 327 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 TINAGQ9UJW2 476 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 RCOR1Q9UKL0 485 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 LSM4Q9Y4Z0 139 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 IGHV4OR15-8A0A075B7B6 117 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 MYO1GB0I1T2 1018 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 HNRNPCL2B2RXH8 293 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 H0YAE9 185 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 IFNL4K9M1U5 179 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 TULP2O00295 520 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 CASQ2O14958 399 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 TNFSF14O43557 240 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 KIAA0754O94854 1291 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SNX4O95219 450 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 APBB3O95704 486 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 HEXBP07686 556 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 F7P08709 466 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 HOXB5P09067 269 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SPARCP09486 303 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 MYBL1P10243 752 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SFTPCP11686 197 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 DGKAP23743 735 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 TLX1P31314 330 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 SHMT1P34896 483 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 AMPHP49418 695 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 RAD23BP54727 409 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 ACTN3Q08043 901 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 ZNF155Q12901 538 aaPredicted RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 ILF3Q12906 894 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS50-209ENST00000467326 ZBTB17Q13105 803 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 AIMP2Q13155 320 aaKnown RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 NTRK2Q16620 822 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 WSCD2Q2TBF2 565 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 EIF2S3LQ2VIR3 472 aaKnown RBP3.72□□□□□ -1.81
VPS50-209ENST00000467326 TMEM154Q6P9G4 183 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 C16orf87Q6PH81 154 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 SLC36A4Q6YBV0 504 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 QSOX2Q6ZRP7 698 aa3.72□□□□□ -1.81
VPS50-209ENST00000467326 TMEM110Q86TL2 294 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms