RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 GLMNQ92990 594 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 NAT6Q93015 286 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 ERP44Q9BS26 406 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 PLAC1Q9HBJ0 212 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 EVA1BQ9NVM1 165 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 WHRNQ9P202 907 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 TBC1D29Q9UFV1 150 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 DOLKQ9UPQ8 538 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 CHD8Q9HCK8 2581 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 ASXL3Q9C0F0 2248 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 FRYQ5TBA9 3013 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 KLHL33A6NCF5 533 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 E7ESA3 106 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 BANF1O75531 89 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 USP1O94782 785 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 TRIM16O95361 564 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 KCNA4P22459 653 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 FASLGP48023 281 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 DUSP3P51452 185 aaPredicted RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 ITGA8P53708 1063 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 MAZP56270 477 aaKnown RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 DAB2P98082 770 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 HIF1AQ16665 826 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 INSCQ1MX18 579 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 ANKRD20A4Q4UJ75 823 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 AARS2Q5JTZ9 985 aaKnown RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 PERM1Q5SV97 790 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 AGAP9Q5VTM2 703 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 CES3Q6UWW8 571 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 WASH2PQ6VEQ5 465 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 CERS6Q6ZMG9 384 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 DET1Q7L5Y6 550 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 EFL1Q7Z2Z2 1120 aaKnown RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 PNPLA1Q8N8W4 532 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 IFI44Q8TCB0 444 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 SLC37A2Q8TED4 501 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 NAT14Q8WUY8 206 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 PATE1Q8WXA2 126 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.87□□□□□ -0.67
MSH5-212ENST00000467319 SGF29Q96ES7 293 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 STAMBPL1Q96FJ0 436 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 DCUN1D1Q96GG9 259 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 TTC25Q96NG3 672 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 FCRL3Q96P31 734 aaPredicted RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 WASH6PQ9NQA3 447 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 KLC4Q9NSK0 619 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 CATSPERZQ9NTU4 200 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 PADI4Q9UM07 663 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 DNMT3AQ9Y6K1 912 aaPredicted RBP10.87□□□□□ -0.67
MSH5-212ENST00000467319 ASPMQ8IZT6 3477 aa10.87□□□□□ -0.67
MSH5-212ENST00000467319 MGAT4DA6NG13 374 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 NDC80O14777 642 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 NUDT21O43809 227 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 KCNJ13O60928 360 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 AP2A2O94973 939 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 VAPBO95292 243 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 RALBP11234 206 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 CDK4P11802 303 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 F3P13726 295 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 ATP1B2P14415 290 aaPredicted RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 BRAFP15056 766 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 GLB1P16278 677 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 VCLP18206 1134 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 PGAM1P18669 254 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 NSG1P42857 185 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 UBE2IP63279 158 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 SHC2P98077 582 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 CRYMQ14894 314 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 SMAD1Q15797 465 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 DNAJC21Q5F1R6 531 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 LYPLAL1Q5VWZ2 237 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 C8orf74Q6P047 294 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 CASC4Q6P4E1 433 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 TMEM220Q6QAJ8 160 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 ZDHHC24Q6UX98 284 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 FAM83HQ6ZRV2 1179 aaPredicted RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 TAS2R42Q7RTR8 314 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 AMZ2Q86W34 360 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 IGDCC3Q8IVU1 814 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 MMGT1Q8N4V1 131 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 CLDN19Q8N6F1 224 aa10.86□□□□□ -0.67
MSH5-212ENST00000467319 BEND7Q8N7W2 519 aaPredicted RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 NOA1Q8NC60 698 aaKnown RBP10.86□□□□□ -0.67
MSH5-212ENST00000467319 OR6C4Q8NGE1 309 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms