RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PRR23BQ6ZRT6 265 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 OXR1Q8N573 874 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 SUMF1Q8NBK3 374 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 OR56A4Q8NGH8 313 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 ISL2Q96A47 359 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 SGF29Q96ES7 293 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 DCUN1D1Q96GG9 259 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 VPS39Q96JC1 886 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 GPR22Q99680 433 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 AARSD1Q9BTE6 412 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 CAAP1Q9H8G2 361 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 PPCSQ9HAB8 311 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 MRPL40Q9NQ50 206 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 ZNF446Q9NWS9 450 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 PSMC3IPQ9P2W1 217 aaPredicted RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 GULP1Q9UBP9 304 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 SUSD2Q9UGT4 822 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 GNPTGQ9UJJ9 305 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 SUFUQ9UMX1 484 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 SMG5Q9UPR3 1016 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 PCDHB1Q9Y5F3 818 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 RIF1Q5UIP0 2472 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 ANKRD12Q6UB98 2062 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 OR2AG2A6NM03 316 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 NIPSNAP2O75323 286 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 WISP3O95389 354 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 INHBAP08476 426 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ITGA2BP08514 1039 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 RALBP11234 206 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 GNSP15586 552 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 CD9P21926 228 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 FDXRP22570 491 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 HTR1BP28222 390 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 FMO4P31512 558 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 CTSKP43235 329 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 MSH2P43246 934 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 SERPINB9P50453 376 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 CDKN2DP55273 166 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ILF2Q12905 390 aaKnown RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 PTK2BQ14289 1009 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ZKSCAN8Q15776 578 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 LPAL2Q16609 132 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 PYCR3Q53H96 274 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 TMEM220Q6QAJ8 160 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ENPP7Q6UWV6 458 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 LRIG3Q6UXM1 1119 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 DET1Q7L5Y6 550 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 PARGQ86W56 976 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 BEND7Q8N7W2 519 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 GIMAP7Q8NHV1 300 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 PIGKQ92643 395 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 MRRFQ96E11 262 aaKnown RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 ATXN7L3BQ96GX2 97 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ZNF514Q96K75 400 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 LINC00615Q96LM1 132 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 NDNQ99608 321 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 OLFM1Q99784 485 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 CCDC77Q9BR77 488 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ROPN1BQ9BZX4 212 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 KCNH6Q9H252 994 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 ROPN1Q9HAT0 212 aaPredicted RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 CAPN10Q9HC96 672 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 CTNNAL1Q9UBT7 734 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 LGALS13Q9UHV8 139 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 KLF15Q9UIH9 416 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 GPR34Q9UPC5 381 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 MTO1Q9Y2Z2 717 aaKnown RBP10.98□□□□□ -0.65
VCP-204ENST00000466100 ST14Q9Y5Y6 855 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 COMMD10Q9Y6G5 202 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 DGKBQ9Y6T7 804 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
VCP-204ENST00000466100 GOLGA4Q13439 2230 aaKnown RBP10.97□□□□□ -0.65
VCP-204ENST00000466100 A0A1B0GVT2 93 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 FAM95CA0A1B0GW59 222 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 IQCF5A8MTL0 148 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 H3BMM5 538 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 QSOX1O00391 747 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 MAP2K7O14733 419 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 GRID2O43424 1007 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 MAGEC1O60732 1142 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 CDH16O75309 829 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 SASH3O75995 380 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 ASMTLO95671 621 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 NME1P15531 152 aaKnown RBP10.97□□□□□ -0.65
VCP-204ENST00000466100 CNTFP26441 200 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 NBL1P41271 181 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 MAGEA12P43365 314 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 SLCO1A2P46721 670 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 CLCN7P51798 805 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 SRP54P61011 504 aaKnown RBP10.97□□□□□ -0.65
VCP-204ENST00000466100 BMPR2Q13873 1038 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 GTF2H3Q13889 308 aa10.97□□□□□ -0.65
VCP-204ENST00000466100 GBX1Q14549 363 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms