RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM86AQ8N2M4 240 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZCCHC7Q8N3Z6 543 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 FBXO39Q8N4B4 442 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 RTL3Q8N8U3 475 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 ATP6V0D2Q8N8Y2 350 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 OR8J3Q8NGG0 315 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 OR52E4Q8NGH9 312 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 FAR1Q8WVX9 515 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 C17orf50Q8WW18 174 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 POP5Q969H6 163 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 YIPF6Q96EC8 236 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SMARCD1Q96GM5 515 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 DGCR6LQ9BY27 220 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 DERL2Q9GZP9 239 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 KLHL25Q9H0H3 589 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 MROH8Q9H579 483 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SP140LQ9H930 580 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 RMI1Q9H9A7 625 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CPNE5Q9HCH3 593 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 VTA1Q9NP79 307 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 HEBP1Q9NRV9 189 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 RNF19AQ9NV58 838 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SMPD4Q9NXE4 827 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 KLK14Q9P0G3 267 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 MARCH4Q9P2E8 410 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 KLHL3Q9UH77 587 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 USP22Q9UPT9 525 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 V9GYQ6 96 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 NYNRINQ9P2P1 1898 aaKnown RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 A0A0G2JLL6 359 aaPredicted RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 ISPDA4D126 451 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 RRN3P2A6NIE6 340 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 WASH4PA8MWX3 477 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 M0R3G1 203 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 SLC16A6O15403 523 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 IRAK2O43187 625 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 KLK8O60259 260 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 MRPS14O60783 128 aaKnown RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 XYLBO75191 536 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 GMNNO75496 209 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 USP2O75604 605 aaPredicted RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 PEX11BO96011 259 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 ITGAMP11215 1152 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 IL12AP29459 219 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 PCYT1AP49585 367 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 RABGGTBP53611 331 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 ISL1P61371 349 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 SELENBP1Q13228 472 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 KCNAB2Q13303 367 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 UBXN11Q5T124 520 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 MRNIPQ6NTE8 343 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 TAPT1Q6NXT6 567 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 TXNDC11Q6PKC3 985 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 NECAB2Q7Z6G3 386 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 PRRT2Q7Z6L0 340 aaPredicted RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 RBM23Q86U06 439 aaKnown RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 GALNT13Q8IUC8 556 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 SULF1Q8IWU6 871 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 OR6P1Q8NGX9 317 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 STAG3L4Q8TBR4 150 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 DYNC2LI1Q8TCX1 351 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 SH3RF2Q8TEC5 729 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 TADA1Q96BN2 335 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 PCED1BQ96HM7 432 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 TXNDC15Q96J42 360 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 AARSD1Q9BTE6 412 aaKnown RBP7.22□□□□□ -1.25
USP48-206ENST00000464577 HERC2P3Q9BVR0 1158 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 BTBD2Q9BX70 525 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 SYTL2Q9HCH5 934 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 CSNK1G1Q9HCP0 422 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 TMEM30AQ9NV96 361 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 SLAMF8Q9P0V8 285 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 C3orf18Q9UK00 162 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 CDH9Q9ULB4 789 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 RIMKLBQ9ULI2 386 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 MCM3APO60318 1980 aa7.22□□□□□ -1.25
USP48-206ENST00000464577 LOC100130705A0A1B0GUX0 176 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 SYCE1LA8MT33 242 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 SUPT3HB4E1H0 165 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 LDB2O43679 373 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 CNTN5O94779 1100 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 NADKO95544 446 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 SLC4A1P02730 911 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 CD40LGP29965 261 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 PIGAP37287 484 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 CASP2P42575 452 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 RENBPP51606 427 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 PWP1Q13610 501 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 ADPRMQ3LIE5 342 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 GJC2Q5T442 439 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 KDELC2Q7Z4H8 507 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 CTU1Q7Z7A3 348 aaKnown RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 SYVN1Q86TM6 617 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 ADCK1Q86TW2 530 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 LDB1Q86U70 411 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 ARMC8Q8IUR7 673 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 LGI2Q8N0V4 545 aa7.21□□□□□ -1.25
USP48-206ENST00000464577 RYBPQ8N488 228 aaPredicted RBP7.21□□□□□ -1.25
USP48-206ENST00000464577 OR5K1Q8NHB7 308 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms