RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ANKRD22Q5VYY1 191 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 ARMC3Q5W041 872 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 C8orf74Q6P047 294 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 TMEM220Q6QAJ8 160 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 SNX20Q7Z614 316 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 CCNJLQ8IV13 435 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 BBOF1Q8ND07 529 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 SNF8Q96H20 258 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 DEPDC7Q96QD5 511 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 LRRC1Q9BTT6 524 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 CARD6Q9BX69 1037 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 ZCCHC2Q9C0B9 1178 aaKnown RBP16.78■□□□□ 0.28
VPS52-215ENST00000464425 RAB17Q9H0T7 212 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 LRRN3Q9H3W5 708 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 SLC30A1Q9Y6M5 507 aa16.78■□□□□ 0.28
VPS52-215ENST00000464425 A0A1W2PQM1 296 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 HEATR9A2RTY3 570 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 PPM1DO15297 605 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 POP7O75817 140 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 SEC31AO94979 1220 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 ADRA1DP25100 572 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 ALDH4A1P30038 563 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 ARSDP51689 593 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 OR1D5P58170 312 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 SPIDRQ14159 915 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 MORF4L2Q15014 288 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 SEPT7Q16181 437 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 FNBP1LQ5T0N5 605 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 IZUMO3Q5VZ72 239 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 IYDQ6PHW0 289 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 RBM44Q6ZP01 1051 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 TAS2R42Q7RTR8 314 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 CACTIN-AS1Q8N1I8 211 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 BEND7Q8N7W2 519 aaPredicted RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 NOA1Q8NC60 698 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 SLC37A2Q8TED4 501 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 ULK4Q96C45 1275 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 CCDC97Q96F63 343 aaPredicted RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 DCUN1D1Q96GG9 259 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 TIMM29Q9BSF4 260 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 XAB2Q9HCS7 855 aaKnown RBP16.77■□□□□ 0.28
VPS52-215ENST00000464425 WHRNQ9P202 907 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 SLC2A6Q9UGQ3 507 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 PCDHB1Q9Y5F3 818 aa16.77■□□□□ 0.28
VPS52-215ENST00000464425 MYLKQ15746 1914 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 ASPMQ8IZT6 3477 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 OR51F1A6NGY5 319 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 NTN3O00634 580 aaPredicted RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 B4GAT1O43505 415 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 TMEM63AO94886 807 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 PROS1P07225 676 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 PNLIPP16233 465 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 PBLDP30039 288 aaPredicted RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 RPL21P46778 160 aaKnown RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 CLCNKAP51800 687 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 CRADDP78560 199 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 MRPS25P82663 173 aaKnown RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 B4GALNT1Q00973 533 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 ISXQ2M1V0 245 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 AMZ1Q400G9 498 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 HIBCHQ6NVY1 386 aaPredicted RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 ZNF534Q76KX8 674 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 SPRED1Q7Z699 444 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 C11orf96Q7Z7L8 435 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 CAND1Q86VP6 1230 aaKnown RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 AMZ2Q86W34 360 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 ZNF761Q86XN6 746 aaPredicted RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 NXPE1Q8N323 547 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 SFRP1Q8N474 314 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 WDR48Q8TAF3 677 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 SEC14L1Q92503 715 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 ZNF778Q96MU6 729 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 GFM1Q96RP9 751 aaKnown RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 RANBP9Q96S59 729 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 IL22Q9GZX6 179 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 BFARQ9NZS9 450 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 ATXN7L1Q9ULK2 861 aaPredicted RBP16.76■□□□□ 0.27
VPS52-215ENST00000464425 SNX24Q9Y343 169 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 TCAF1Q9Y4C2 921 aa16.76■□□□□ 0.27
VPS52-215ENST00000464425 CCDC162PA2VCL2 907 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 A6NCN8 305 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 AGAP14A8MT82 685 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 PDZK1P1A8MUH7 402 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 H7C0S8 307 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 TP73O15350 636 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 TCEA3O75764 348 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 F3P13726 295 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 VCLP18206 1134 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 PSMA3P25788 255 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
VPS52-215ENST00000464425 CACNG1Q06432 222 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 CYP4F3Q08477 520 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 GPR33Q49SQ1 333 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 TSTD2Q5T7W7 516 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 ZNF438Q7Z4V0 828 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 SERPINA9Q86WD7 417 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 PIANPQ8IYJ0 282 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms