RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
ERCC3-205ENST00000460485 CACNA1BQ00975 2339 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 DMDP11532 3685 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 TSPAN11A1L157 253 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 UBXN8O00124 270 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 BTN3A1O00481 513 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 KPNA5O15131 536 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RAD51BO15315 384 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 LINC01565O15544 149 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CLASP2O75122 1294 aaKnown RBP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 ECI2O75521 394 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 TSPAN12O95859 305 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RHOP08100 348 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SRPRAP08240 638 aaKnown RBP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 GM2AP17900 193 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CHRM3P20309 590 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 NSG1P42857 185 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 PIK3CGP48736 1102 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CLCN7P51798 805 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 DCDC1P59894 354 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 ECT2LQ008S8 904 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CLCQ05315 142 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CAMK1Q14012 370 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RCN1Q15293 331 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 E2F5Q15329 346 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 PFKFB4Q16877 469 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 PLPP4Q5VZY2 271 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 PTRHD1Q6GMV3 140 aaKnown RBP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RIPOR1Q6ZS17 1223 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 FRA10AC1Q70Z53 315 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SPATA19Q7Z5L4 167 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SERPINA9Q86WD7 417 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SNX32Q86XE0 403 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CAMK1DQ8IU85 385 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 DEFB107AQ8IZN7 70 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 MYO1HQ8N1T3 1032 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RYBPQ8N488 228 aaPredicted RBP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SPPL3Q8TCT6 385 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 LINGO1Q96FE5 620 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 ZNF382Q96SR6 550 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SUV39H2Q9H5I1 410 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 ASB8Q9H765 288 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 RIC8BQ9NVN3 520 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 SMOXQ9NWM0 555 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 CRLS1Q9UJA2 301 aa13.95□□□□□ -0.18
ERCC3-205ENST00000460485 DYTNA2CJ06 578 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PSMD12O00232 456 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 SMAD6O43541 496 aaKnown RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 SKAP2O75563 359 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 CRCPO75575 148 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 MATN4O95460 622 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ESRRBO95718 433 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 MT-CO1P00395 513 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 UROSP10746 265 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 IDO1P14902 403 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 HLA-FP30511 346 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 HNF1BP35680 557 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 MAPK9P45984 424 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PSMD8P48556 350 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 NUDT2P50583 147 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ERVFC1P60507 584 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ART3Q13508 389 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 TSNQ15631 228 aaKnown RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 CDKN3Q16667 212 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 GEN1Q17RS7 908 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 FUT11Q495W5 492 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PRSS36Q5K4E3 855 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ZFP1Q6P2D0 407 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PRMT9Q6P2P2 845 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 LARP4Q71RC2 724 aaKnown RBP eCLIP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 TMEM126BQ8IUX1 230 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 NXPE1Q8N323 547 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 POU5F2Q8N7G0 328 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PDPRQ8NCN5 879 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 UBTD2Q8WUN7 234 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ROPN1LQ96C74 230 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 CATSPER2Q96P56 530 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 BBS2Q9BXC9 721 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 FAM126AQ9BYI3 521 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 MID1IP1Q9NPA3 183 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 ZDHHC3Q9NYG2 299 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 HECAQ9UBI9 543 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 INTS6Q9UL03 887 aaKnown RBP13.94□□□□□ -0.18
ERCC3-205ENST00000460485 L3MBTL1Q9Y468 752 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 LRRC42Q9Y546 428 aa13.94□□□□□ -0.18
ERCC3-205ENST00000460485 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
ERCC3-205ENST00000460485 GVINP1Q7Z2Y8 2422 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms