RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KLHL4Q9C0H6 718 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 DENND2DQ9H6A0 471 aaPredicted RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 CRNNQ9UBG3 495 aaPredicted RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 DBNLQ9UJU6 430 aaKnown RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 B3GALT5Q9Y2C3 310 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 AMDHD2Q9Y303 409 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PCDHAC2Q9Y5I4 1007 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PTPRCP08575 1304 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 PDS5AQ29RF7 1337 aaKnown RBP3.32□□□□□ -1.88
RFC4-211ENST00000460408 ZNF541Q9H0D2 1346 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 EVPLQ92817 2033 aa3.32□□□□□ -1.88
RFC4-211ENST00000460408 KIF21AQ7Z4S6 1674 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 WDR62O43379 1518 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 SYNJ2O15056 1496 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 NCAPD3P42695 1498 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ASTN2O75129 1339 aaPredicted RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 MAGEB17A8MXT2 336 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 J3QR06 171 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 HLA-DOBP13765 273 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 PLA2G2AP14555 144 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 MYOD1P15172 320 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 DSCR9P59020 149 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 SLC20A2Q08357 652 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ZNF628Q5EBL2 1059 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 GFRALQ6UXV0 394 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 HAUS6Q7Z4H7 955 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 LDB1Q86U70 411 aaPredicted RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 GPR180Q86V85 440 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 TMEM219Q86XT9 240 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ODF3L1Q8IXM7 274 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 GUF1Q8N442 669 aaKnown RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 LILRB1Q8NHL6 650 aaPredicted RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 GSDMBQ8TAX9 411 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 SLC38A5Q8WUX1 472 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 DNAAF4Q8WXU2 420 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 TMEM19Q96HH6 336 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 DGAT2Q96PD7 388 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ZNF385AQ96PM9 386 aaKnown RBP3.31□□□□□ -1.88
RFC4-211ENST00000460408 SMC6Q96SB8 1091 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 HGH1Q9BTY7 390 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 SPATC1LQ9H0A9 340 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 SLCO5A1Q9H2Y9 848 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 KCNK15Q9H427 330 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 CD93Q9NPY3 652 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 GDE1Q9NZC3 331 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 AMACRQ9UHK6 382 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 ANAPC2Q9UJX6 822 aa3.31□□□□□ -1.88
RFC4-211ENST00000460408 C4orf47A7E2U8 309 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 TMEM189-UBE2V1I3L0A0 370 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 NDUFS4O43181 175 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 LDB3O75112 727 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ZBTB11O95625 1053 aaPredicted RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 TPOP07202 933 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 T-ENOLP0DO92 83 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ITGA2P17301 1181 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 NR2F2P24468 414 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 NMBRP28336 390 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 TNFRSF8P28908 595 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 TMPOP42166 694 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 PEX5P50542 639 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ARSEP51690 589 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 SIRPAP78324 504 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ZXDBP98169 803 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 PPP2R2BQ00005 443 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 PDE1BQ01064 536 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 RELQ04864 619 aaPredicted RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 CALD1Q05682 793 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 GAGE2BQ13066 116 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ZNF234Q14588 700 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 RASA2Q15283 850 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 MEP1AQ16819 746 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 GAGE2EQ4V326 116 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 FAM98BQ52LJ0 330 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 IGSF11Q5DX21 431 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ADALQ6DHV7 355 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 DHRS7BQ6IAN0 325 aaPredicted RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 FAM109BQ6ICB4 259 aaPredicted RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 CREB3L2Q70SY1 520 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 INTS8Q75QN2 995 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 PLPPR4Q7Z2D5 763 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 C16orf82Q7Z2V1 217 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ARMC9Q7Z3E5 817 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 CEP57Q86XR8 500 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 RNF113BQ8IZP6 322 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 SLC5A8Q8N695 610 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ZNF441Q8N8Z8 693 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 AVL9Q8NBF6 648 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 KCTD6Q8NC69 237 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 APPL2Q8NEU8 664 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ADGRG7Q96K78 797 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 CDRT15Q96T59 188 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 SEMA3CQ99985 751 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 ZPBPQ9BS86 351 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 APOL6Q9BWW8 343 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms