RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ADAM15Q13444 863 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 QPCTQ16769 361 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 GSTA3Q16772 222 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 TANGO2Q6ICL3 276 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 KIAA0408Q6ZU52 694 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 Q6ZVU0 165 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CPLX4Q7Z7G2 160 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CMC1Q7Z7K0 106 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PCDH20Q8N6Y1 951 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC4-207ENST00000460168 TEX19Q8NA77 164 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 OR4K2Q8NGD2 314 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 LILRB4Q8NHJ6 448 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CYB5D2Q8WUJ1 264 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 MYLIPQ8WY64 445 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 GATA6Q92908 595 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 MRPL1Q9BYD6 325 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 MFSD1Q9H3U5 465 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 EPB41L1Q9H4G0 881 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ZDHHC6Q9H6R6 413 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 C8orf33Q9H7E9 229 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 CAB39LQ9H9S4 337 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 TRPV4Q9HBA0 871 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SDHAF3Q9NRP4 125 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SLC39A1Q9NY26 324 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CLDND1Q9NY35 253 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 OBP2AQ9NY56 170 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SLC39A10Q9ULF5 831 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SLC8A2Q9UPR5 921 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 TDRKHQ9Y2W6 561 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 WDR91A4D1P6 747 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CCT8L1PA6NM43 557 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 TCP11X1B4DZS4 312 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 B8ZZF3 427 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PRMT3O60678 531 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 TULP3O75386 442 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ATP5BP06576 529 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 MTHFD1P11586 935 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 CTPS1P17812 591 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 LPOP22079 712 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 CRHR1P34998 444 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 HADHAP40939 763 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ACVR1Q04771 509 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PDE1CQ14123 709 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 GRM3Q14832 879 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 KPNB1Q14974 876 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CILP2Q8IUL8 1156 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC4-207ENST00000460168 ARHGAP24Q8N264 748 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 CPSF7Q8N684 471 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 TTLQ8NG68 377 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 DNAJC9Q8WXX5 260 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SORCS1Q8WY21 1168 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ZNF317Q96PQ6 595 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 GPR22Q99680 433 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 MCMBPQ9BTE3 642 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 VPS11Q9H270 941 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ADNPQ9H2P0 1102 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 FBXO6Q9NRD1 293 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 NLE1Q9NVX2 485 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 ZNHIT2Q9UHR6 403 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 FBXO10Q9UK96 956 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 ERVW-1Q9UQF0 538 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PLLPQ9Y342 182 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SH3PXD2BA1X283 911 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 OTOL1A6NHN0 477 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 TRAFD1O14545 582 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 STX7O15400 261 aaKnown RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 HTRA2O43464 458 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 GLRA3O75311 464 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 TBX10O75333 385 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 HAUS5O94927 633 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 TOP3BO95985 862 aaKnown RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 CHEK2O96017 543 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 GSRP00390 522 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 GOT2P00505 430 aaKnown RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 ALPIP09923 528 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 FCARP24071 287 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 GABRB3P28472 473 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 CRABP2P29373 138 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 RPL26P61254 145 aaKnown RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 DLX2Q07687 328 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 USP10Q14694 798 aaKnown RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 PTPRRQ15256 657 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 Q3ZCU0 254 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 MRNIPQ6NTE8 343 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 VITQ6UXI7 678 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 DPY19L3Q6ZPD9 716 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 KIAA0907Q7Z7F0 614 aaPredicted RBP10.28□□□□□ -0.76
HERC4-207ENST00000460168 GATAD2AQ86YP4 633 aa10.28□□□□□ -0.76
HERC4-207ENST00000460168 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms