RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ARL10Q8N8L6 244 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 BBOF1Q8ND07 529 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 SEC14L1Q92503 715 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 CFAP36Q96G28 342 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 APOLD1Q96LR9 279 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 TTC25Q96NG3 672 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 TIMM29Q9BSF4 260 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 OSGEPL1Q9H4B0 414 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 SLC32A1Q9H598 525 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 FAM8A1Q9UBU6 413 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
COL18A1-206ENST00000459895 GPR34Q9UPC5 381 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 TEX264Q9Y6I9 313 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 PIKFYVEQ9Y2I7 2098 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ARID1BQ8NFD5 2236 aaPredicted RBP12.64□□□□□ -0.39
COL18A1-206ENST00000459895 A6NCN8 305 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 NEMP2A6NFY4 417 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 TPP1O14773 563 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 KMOO15229 486 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 NOBOXO60393 691 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 OR1I1O60431 355 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 ZNF7P17097 686 aaPredicted RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 PAMP19021 973 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SLC1A2P43004 574 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 ID4P47928 161 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SEPT7Q16181 437 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 TYSND1Q2T9J0 566 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 PPM1JQ5JR12 505 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 AARS2Q5JTZ9 985 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 DNTTIP2Q5QJE6 756 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 STEAP4Q687X5 459 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 ZNF470Q6ECI4 717 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 GUSBP11Q6P575 273 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 TMEM220Q6QAJ8 160 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 CLDN19Q8N6F1 224 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 FBXO36Q8NEA4 188 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 FAM46DQ8NEK8 389 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 LKAAEAR1Q8TD35 194 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 ART4Q93070 314 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SGF29Q96ES7 293 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 DCUN1D1Q96GG9 259 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 EBNA1BP2Q99848 306 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 DUSP23Q9BVJ7 150 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 KLC4Q9NSK0 619 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 ZDHHC18Q9NUE0 388 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
COL18A1-206ENST00000459895 SLC17A6Q9P2U8 582 aa12.63□□□□□ -0.39
COL18A1-206ENST00000459895 CABIN1Q9Y6J0 2220 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 LDOC1O95751 146 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 POLBP06746 335 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 RALBP11234 206 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 OGNP20774 298 aaKnown RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ECHS1P30084 290 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 NSG1P42857 185 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 PLTPP55058 493 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 SIM1P81133 766 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 DAB2P98082 770 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 NFE2L1Q14494 772 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 LONRF1Q17RB8 773 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 SPANXN3Q5MJ09 141 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 UNC5AQ6ZN44 842 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 CENPUQ71F23 418 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 GLRX5Q86SX6 157 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 KCNMB4Q86W47 210 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ZBED8Q8IZ13 594 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ZDHHC1Q8WTX9 485 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 CDC6Q99741 560 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 DPEP2Q9H4A9 486 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 C20orf96Q9NUD7 363 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 GULP1Q9UBP9 304 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 TBC1D29Q9UFV1 150 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ZC3H7BQ9UGR2 993 aaKnown RBP12.62□□□□□ -0.39
COL18A1-206ENST00000459895 SPTBN4Q9H254 2564 aa12.62□□□□□ -0.39
COL18A1-206ENST00000459895 ARHGEF17Q96PE2 2063 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 PTPRZ1P23471 2315 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-206ENST00000459895 ADAMTS20P59510 1910 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 TNFSF14O43557 240 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 SNX2O60749 519 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CKMT1AP12532 417 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 CEACAM1P13688 526 aa12.61□□□□□ -0.39
COL18A1-206ENST00000459895 TTPAP49638 278 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms