RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 SCAMP1O15126 338 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 NDUFS3O75489 264 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 C1orf61Q13536 156 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 UAP1L1Q3KQV9 507 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 CRTC3Q6UUV7 619 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 ALYREFQ86V81 257 aaKnown RBP20.27■□□□□ 0.84
FAM3A-217ENST00000457212 LRRC6Q86X45 466 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 GATAD2AQ86YP4 633 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 CILP2Q8IUL8 1156 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 ZNF547Q8IVP9 402 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 SGF29Q96ES7 293 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 TIMM29Q9BSF4 260 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 BOCQ9BWV1 1114 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 CLPBQ9H078 707 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 UCKL1Q9NWZ5 548 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 NFU1Q9UMS0 254 aa20.27■□□□□ 0.84
FAM3A-217ENST00000457212 SPAG6O75602 509 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 ANXA6P08133 673 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 ALPPL2P10696 532 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CD59P13987 128 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 VCLP18206 1134 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 TNFRSF8P28908 595 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 GRK6P43250 576 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 PRLHRP49683 370 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CLCNKAP51800 687 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CTSCP53634 463 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CTBSQ01459 385 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 HSP90AA5PQ58FG0 334 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 ZNF470Q6ECI4 717 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 ZNF449Q6P9G9 518 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CYS1Q717R9 158 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 DET1Q7L5Y6 550 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CHST15Q7LFX5 561 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 LDB1Q86U70 411 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 UBXN4Q92575 508 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 LINC00615Q96LM1 132 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 C9orf72Q96LT7 481 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 DUSP23Q9BVJ7 150 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 CAAP1Q9H8G2 361 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 INTS10Q9NVR2 710 aaKnown RBP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 NLGN3Q9NZ94 848 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 MOCS1Q9NZB8 636 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 IL1RAPL1Q9NZN1 696 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 DOLKQ9UPQ8 538 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 PRKAB1Q9Y478 270 aa20.26■□□□□ 0.83
FAM3A-217ENST00000457212 PCYT1BQ9Y5K3 369 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-217ENST00000457212 OR2AG2A6NM03 316 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 PRMT5O14744 637 aaPredicted RBP20.25■□□□□ 0.83
FAM3A-217ENST00000457212 YY2O15391 372 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 SGTAO43765 313 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 GSTM1P09488 218 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 ERVK-10P10266 1014 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 ACP5P13686 325 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 RPS3P23396 243 aaKnown RBP eCLIP20.25■□□□□ 0.83
FAM3A-217ENST00000457212 GSTM4Q03013 218 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 INSCQ1MX18 579 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 KIAA0408Q6ZU52 694 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 TAF8Q7Z7C8 310 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 C11orf96Q7Z7L8 435 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 CNTN4Q8IWV2 1026 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 UNC5BQ8IZJ1 945 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 ANKZF1Q9H8Y5 726 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 VPS37BQ9H9H4 285 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 PPANQ9NQ55 473 aaKnown RBP20.25■□□□□ 0.83
FAM3A-217ENST00000457212 IARS2Q9NSE4 1012 aaKnown RBP20.25■□□□□ 0.83
FAM3A-217ENST00000457212 FBXO5Q9UKT4 447 aa20.25■□□□□ 0.83
FAM3A-217ENST00000457212 OR1I1O60431 355 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 POP7O75817 140 aaKnown RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 CELA2BP08218 269 aaPredicted RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 OR56A5P0C7T3 313 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 SDHBP21912 280 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 SSTR1P30872 391 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 ADARP55265 1226 aaKnown RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 DMPKQ09013 629 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 MGAT5Q09328 741 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 SLMAPQ14BN4 828 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 SMAD1Q15797 465 aaKnown RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 TRMT10BQ6PF06 316 aaKnown RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 C3orf62Q6ZUJ4 267 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 AMZ2Q86W34 360 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 NRROSQ86YC3 692 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 DENND6AQ8IWF6 608 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 CLDN19Q8N6F1 224 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 PNPLA1Q8N8W4 532 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 OR4C6Q8NH72 309 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 CCL4L1Q8NHW4 92 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 LPGAT1Q92604 370 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 CCDC97Q96F63 343 aaPredicted RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 P2RY12Q9H244 342 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 PLEKHM1Q9Y4G2 1056 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 PCDHB1Q9Y5F3 818 aa20.24■□□□□ 0.83
FAM3A-217ENST00000457212 ASCC3Q8N3C0 2202 aaKnown RBP20.24■□□□□ 0.83
FAM3A-217ENST00000457212 C17orf113A0A1B0GUU1 675 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 MGAT4DA6NG13 374 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 FFAR2O15552 330 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 S1PR4O95977 384 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 FTH1P02794 183 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 GIMD1P0DJR0 217 aa20.23■□□□□ 0.83
FAM3A-217ENST00000457212 ACTR1BP42025 376 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms