RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 DHFR2Q86XF0 187 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC41A1Q8IVJ1 513 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SFRP1Q8N474 314 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ASCC1Q8N9N2 400 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SYT14Q8NB59 555 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PJA1Q8NG27 643 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GRAPLQ8TC17 118 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ACMSDQ8TDX5 336 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SEPT8Q92599 483 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FUBP1Q96AE4 644 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PDLIM5Q96HC4 596 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 DHRS9Q9BPW9 319 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TCF25Q9BQ70 676 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF717Q9BY31 904 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TASP1Q9H6P5 420 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF408Q9H9D4 720 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SDR39U1Q9NRG7 319 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PKD2L2Q9NZM6 624 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC23A1Q9UHI7 598 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 INTS6Q9UL03 887 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TSC2P49815 1807 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SLX4Q8IY92 1834 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 HEATR9A2RTY3 570 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ZW10O43264 779 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CCNKO75909 580 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP2F1P24903 491 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 UQCRC1P31930 480 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 UFM1P61960 85 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CDC20Q12834 499 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PRPSAP1Q14558 356 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CCNYL2Q5T2Q4 361 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC66Q68CR7 880 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SDE2Q6IQ49 451 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF549Q6P9A3 640 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ABRAXAS1Q6UWZ7 409 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LIPIQ6XZB0 460 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 BNIPLQ7Z465 357 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 OR52K2Q8NGK3 314 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC58Q96CX6 371 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 RNF145Q96MT1 663 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ASB2Q96Q27 587 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 RASSF1Q9NS23 344 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ACOXLQ9NUZ1 547 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ACTR3BQ9P1U1 418 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PAK5Q9P286 719 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CPSF3Q9UKF6 684 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TRPC5Q9UL62 973 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 BTRCQ9Y297 605 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ANKRD6Q9Y2G4 727 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD3Q9Y597 815 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TDRD15B5MCY1 1934 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SPTBN2O15020 2390 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DFNA5O60443 496 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 WISP3O95389 354 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 FOSP01100 380 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CHRM5P08912 532 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP4B1P13584 511 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP2A7P20853 494 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CCND2P30279 289 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC19A1P41440 591 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 INCA1Q0VD86 236 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TBCCQ15814 346 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MTERF2Q49AM1 385 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CARD16Q5EG05 197 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 FSCBQ5H9T9 825 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GJC2Q5T442 439 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF677Q86XU0 584 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC71Q8N4P6 559 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 APH1BQ8WW43 257 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DLG3Q92796 817 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DCLRE1CQ96SD1 692 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DPEP3Q9H4B8 488 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SYTL2Q9HCH5 934 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PIGVQ9NUD9 493 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KCNN3Q9UGI6 736 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PGAP2Q9UHJ9 254 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PCDHGB1Q9Y5G3 927 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SCINQ9Y6U3 715 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PLXND1Q9Y4D7 1925 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KIF26AQ9ULI4 1882 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 HELZP42694 1942 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 A0A0J9YYE9 177 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 METTL15A6NJ78 407 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ASB14A6NK59 587 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 UPK3BL1B0FP48 263 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 UPK3BL2E5RIL1 263 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ANKRD28O15084 1053 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF623O75123 536 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MCF2P10911 925 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 HSD17B1P14061 328 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ATF3P18847 181 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LMO2P25791 158 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GSTM2P28161 218 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PTGER2P43116 358 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MLLT6P55198 1093 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PTPN11Q06124 597 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 INSCQ1MX18 579 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 FUT11Q495W5 492 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 RFTN2Q52LD8 501 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms