RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LILRB1Q8NHL6 650 aaPredicted RBP4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 BBS10Q8TAM1 723 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 BICD2Q8TD16 824 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 SLC35F5Q8WV83 523 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 ST6GALNAC6Q969X2 333 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 CAMK1GQ96NX5 476 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 SMC6Q96SB8 1091 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 PCYT2Q99447 389 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 SH3GL2Q99962 352 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 TMEM39BQ9GZU3 492 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 IL1RAPL2Q9NP60 686 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 TMEM51Q9NW97 253 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 HEG1Q9ULI3 1381 aa4.13□□□□□ -1.75
HMGN3P1-201ENST00000453847 A0A1W2PPQ1 181 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 A0A1W2PRV1 198 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 FAM90A10PA6NDY2 464 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 EIF4E1BA6NMX2 242 aaKnown RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 IFIT3O14879 490 aaKnown RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TIMM23O14925 209 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 MDM4O15151 490 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TLR2O60603 784 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 BCAR3O75815 825 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 IFNA2P01563 188 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 VPREB1P12018 145 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 GNAZP19086 355 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CD27P26842 260 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TIA1P31483 386 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 PPATQ06203 517 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TRAF1Q13077 416 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CTTNQ14247 550 aaKnown RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 RCN2Q14257 317 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 DAZAP2Q15038 168 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 MEP1AQ16819 746 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ALS2CLQ60I27 953 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 KRT39Q6A163 491 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CNSTQ6PJW8 725 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 PCSK4Q6UW60 755 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TMEM182Q6ZP80 229 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CAMK1DQ8IU85 385 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 MFN1Q8IWA4 741 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 PCDH20Q8N6Y1 951 aaKnown RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 BOLLQ8N9W6 283 aaKnown RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 UXS1Q8NBZ7 420 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ACVR1CQ8NER5 493 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 OR2AJ1Q8NGZ0 328 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CTCFLQ8NI51 663 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ROBO4Q8WZ75 1007 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TRIB2Q92519 343 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 DPF1Q92782 380 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ORAI1Q96D31 301 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TBC1D31Q96DN5 1066 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 PRMT6Q96LA8 375 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 OR6C1Q96RD1 312 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 FEVQ99581 238 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 EGFL8Q99944 293 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 CACNG6Q9BXT2 260 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 MYNNQ9NPC7 610 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 OR6C3Q9NZP0 311 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ARMCX3Q9UH62 379 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 SLC24A2Q9UI40 661 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 RNF150Q9ULK6 438 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 TTC7AQ9ULT0 858 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 PCDHA12Q9UN75 941 aa4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
HMGN3P1-201ENST00000453847 A0A087X1B8 175 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 SMIM35A0A1B0GVV1 85 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 SMIM30A4D0T7 59 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ANKUB1A6NFN9 424 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 OOEPA6NGQ2 149 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 LINC01548A6NM66 108 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 H0YGN5 161 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ST8SIA3O43173 380 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 XRCC3O43542 346 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ZIC3O60481 467 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 SELENOFO60613 162 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 CNOT3O75175 753 aaKnown RBP4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 IGLV2-14P01704 120 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 FGF2P09038 288 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 DDX5P17844 614 aaKnown RBP4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 CD58P19256 250 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 MPZP25189 248 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 CASP3P42574 277 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 RAD23BP54727 409 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 SLC12A3P55017 1021 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 RPS13P62277 151 aaKnown RBP4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 CSNK2A1P68400 391 aaPredicted RBP4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 CDK3Q00526 305 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 COL10A1Q03692 680 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ZNF91Q05481 1191 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ST3GAL1Q11201 340 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 RPA4Q13156 261 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 SLC39A14Q15043 492 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 C2orf76Q3KRA6 126 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 ODF3L2Q3SX64 289 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 LBHQ53QV2 105 aaPredicted RBP4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 DCAF6Q58WW2 860 aa4.11□□□□□ -1.75
HMGN3P1-201ENST00000453847 Q5PR19 223 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms