RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 FAM187BQ17R55 369 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 PRAMEF19Q5SWL8 479 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 BLOC1S3Q6QNY0 202 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 SPARTQ8N0X7 666 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 IPPQ9Y573 584 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 MYCP01106 439 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 NR4A2P43354 598 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 OR4L1Q8NH43 312 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 MYOCQ99972 504 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TARM1B6A8C7 271 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 VPS4BO75351 444 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 LRATO95237 230 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CDH1P12830 882 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 S100A1P23297 94 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ARNTP27540 789 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 IDH2P48735 452 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TWF1Q12792 350 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 KCNJ8Q15842 424 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 C1QTNF12Q5T7M4 302 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 RAP1GAP2Q684P5 730 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ENPP6Q6UWR7 440 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 HID1Q8IV36 788 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 SCML4Q8N228 414 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PRDM8Q9NQV8 689 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TRMT13Q9NUP7 481 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PRRC2BQ5JSZ5 2229 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PDZK1P1A8MUH7 402 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ARVCFO00192 962 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TFECO14948 347 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CCNKO75909 580 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 G6PDP11413 515 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ARCN1P48444 511 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PTRHD1Q6GMV3 140 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 OR13F1Q8NGS4 319 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 UTP15Q8TED0 518 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 BHMTQ93088 406 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 LINGO1Q96FE5 620 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 DMRTB1Q96MA1 342 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 GIMAP4Q9NUV9 329 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ERVK-18Q9QC07 812 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 COL2A1P02458 1487 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 NUP214P35658 2090 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 AQP9O43315 295 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 IDH3BO43837 385 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 SH3BP5O60239 455 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ECI2O75521 394 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 IGFBP5P24593 272 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 RPS12P25398 132 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 GTF2E2P29084 291 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 OR1E1P30953 314 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CLCNKBP51801 687 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 DEFA1P59665 94 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 DEFA3P59666 94 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CRY1Q16526 586 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 FAM174BQ3ZCQ3 159 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 THOC7Q6I9Y2 204 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 DTWD1Q8N5C7 304 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 LPCAT1Q8NF37 534 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 PROX1Q92786 737 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 CGREF1Q99674 301 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 TRIM39Q9HCM9 518 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 WWOXQ9NZC7 414 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 GMIPQ9P107 970 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
UBE2D3-210ENST00000453744 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 DFNA5O60443 496 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 MGEA5O60502 916 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 RAMP2O60895 175 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 CYP7B1O75881 506 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 MSH3P20585 1137 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 HTR1BP28222 390 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 HOXA11P31270 313 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 EEFSECP57772 596 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 ARHGAP1Q07960 439 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 CADM3Q8N126 398 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 OR4K2Q8NGD2 314 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 RBM4BQ9BQ04 359 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 RBM4Q9BWF3 364 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 YTHDF1Q9BYJ9 559 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms