RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 LMAN2Q12907 356 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 ZNF423Q2M1K9 1284 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 ZNF362Q5T0B9 420 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 ARMC12Q5T9G4 340 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 PAQR3Q6TCH7 311 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 METTL3Q86U44 580 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 PELI3Q8N2H9 469 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 ELMOD1Q8N336 334 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 TRIML2Q8N7C3 387 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 EID2BQ96D98 161 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 MYO19Q96H55 970 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 LMLNQ96KR4 655 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 CDRT15Q96T59 188 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 SLC46A2Q9BY10 475 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 PLGRKTQ9HBL7 147 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 CLEC4EQ9ULY5 219 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 RNF11Q9Y3C5 154 aa15.16■□□□□ 0.02
CCHCR1-208ENST00000451521 ALPK3Q96L96 1907 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PRSS51A0A1B0GVH4 220 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 LEFTY2O00292 366 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 UBFD1O14562 309 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 HTRA2O43464 458 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 SMAD6O43541 496 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PKMP14618 531 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 GJA1P17302 382 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 HMGCLP35914 325 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ATP6V0D1P61421 351 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 MS4A2Q01362 244 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 HERC3Q15034 1050 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PTPRNQ16849 979 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PIGGQ5H8A4 983 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 AARS2Q5JTZ9 985 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 CHSY3Q70JA7 882 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 RPS27LQ71UM5 84 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 BHLHE22Q8NFJ8 381 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 RP9Q8TA86 221 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ZNF106Q9H2Y7 1883 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 BPIFA1Q9NP55 256 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ABCB8Q9NUT2 735 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 COMMD10Q9Y6G5 202 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 KERAO60938 352 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PRAMEF12O95522 483 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 MAPK8P45983 427 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 NAA20P61599 178 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 CTSL3PQ5NE16 218 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PPM1LQ5SGD2 360 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 BNC2Q6ZN30 1099 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 DSELQ8IZU8 1212 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 GRIN3AQ8TCU5 1115 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ASB2Q96Q27 587 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 OSBPL6Q9BZF3 934 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 ZBTB26Q9HCK0 441 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 PKP3Q9Y446 797 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
CCHCR1-208ENST00000451521 KANSL1LA0AUZ9 987 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 LSM1O15116 133 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ZNF821O75541 412 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 SUPT7LO94864 414 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 PSMD7P51665 324 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ATXN3P54252 364 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 PKNOX1P55347 436 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 RAD51Q06609 339 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 C16orf72Q14CZ0 275 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 PLEKHG6Q3KR16 790 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 KCTD21Q4G0X4 260 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ELMSAN1Q6PJG2 1045 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 C16orf89Q6UX73 402 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 NANOGNBQ7Z5D8 188 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 CAMK1DQ8IU85 385 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 NKAPQ8N5F7 415 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 GPR21Q99679 349 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 TM6SF2Q9BZW4 377 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ASAH2Q9NR71 780 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 INTS6Q9UL03 887 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 DOLKQ9UPQ8 538 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 FAM50BQ9Y247 325 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 TRAF6Q9Y4K3 522 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 UBXN8O00124 270 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 SOCS5O75159 536 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ZNF26P17031 533 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 CD70P32970 193 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 PTGER3P43115 390 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 CACNG1Q06432 222 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 CEACAM7Q14002 265 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 ZRANB3Q5FWF4 1079 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 NXNQ6DKJ4 435 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 LYSMD3Q7Z3D4 306 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 SNX32Q86XE0 403 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 RYBPQ8N488 228 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 PTGR2Q8N8N7 351 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 TMEM102Q8N9M5 508 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 KYQ8NBH2 561 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 KLHL32Q96NJ5 620 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 EMILIN2Q9BXX0 1053 aa15.14■□□□□ 0.01
CCHCR1-208ENST00000451521 MRGBPQ9NV56 204 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms