RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR5B17Q8NGF7 314 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CNIH3Q8TBE1 160 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 PPP1R13LQ8WUF5 828 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TMCO6Q96DC7 493 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 REXO5Q96IC2 774 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 QKIQ96PU8 341 aaKnown RBP eCLIP8.54□□□□□ -1.04
LSM5-208ENST00000450169 OMDQ99983 421 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ADPGKQ9BRR6 497 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 NTPCRQ9BSD7 190 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 CNPY3Q9BT09 278 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 KIFC1Q9BW19 673 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ZC3H12CQ9C0D7 883 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.54□□□□□ -1.04
LSM5-208ENST00000450169 POMKQ9H5K3 350 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 SMURF2Q9HAU4 748 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CAPN10Q9HC96 672 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 FBRSL1Q9HCM7 1045 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 EIF2B3Q9NR50 452 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 C14orf119Q9NWQ9 140 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 RAPGEFL1Q9UHV5 662 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TBC1D24Q9ULP9 559 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 LOC100130705A0A1B0GUX0 176 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ATP6AP2A0A1C7CYW4 349 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 GPR182O15218 404 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 NOBOXO60393 691 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 B3GALNT1O75752 331 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ATP6AP2O75787 350 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ANGPTL1O95841 491 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 FADS2O95864 444 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 GPD1P21695 349 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TM4SF1P30408 202 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TGFBR2P37173 567 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 MASP1P48740 699 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CSRP3P50461 194 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ETV1P50549 477 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 PGGT1BP53609 377 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CD83Q01151 205 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 LIPEQ05469 1076 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 COL19A1Q14993 1142 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 RABL3Q5HYI8 236 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 ZNF691Q5VV52 312 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 XKRXQ6PP77 449 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 LURAP1LQ8IV03 231 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CENPLQ8N0S6 344 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 EID3Q8N140 333 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 PJA1Q8NG27 643 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TMEM125Q96AQ2 219 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 SPATA13Q96N96 652 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CGRRF1Q99675 332 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 BEX2Q9BXY8 128 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TRIM54Q9BYV2 358 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 NXF2Q9GZY0 626 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TNFRSF12AQ9NP84 129 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 DDX4Q9NQI0 724 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 B3GNT2Q9NY97 397 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ATP6V1HQ9UI12 483 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 FAM92AA1XBS5 289 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 OR6C70A6NIJ9 312 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 LOC110117498-PIK3R3F6TDL0 507 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 TSPAN4O14817 238 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 ASS1P00966 412 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 ALDOCP09972 364 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 SLC35E2BP0CK96 405 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 CD19P15391 556 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 AVPR1AP37288 418 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 MTHFRP42898 656 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 RPS5P46782 204 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 RAP1GAPP47736 663 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 FCGRTP55899 365 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 SOX10P56693 466 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 NKX3-2P78367 333 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 RHAGQ02094 409 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 MVKQ03426 396 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 SPP2Q13103 211 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 CDK5R2Q13319 367 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 EFR3AQ14156 821 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 USP10Q14694 798 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 GRM3Q14832 879 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 UGCGQ16739 394 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 NOL9Q5SY16 702 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 AGAP9Q5VTM2 703 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 RAP1GAP2Q684P5 730 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 METTL2BQ6P1Q9 378 aaKnown RBP8.53□□□□□ -1.04
LSM5-208ENST00000450169 SCYL2Q6P3W7 929 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 CREB3L2Q70SY1 520 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 LARP4Q71RC2 724 aaKnown RBP eCLIP8.53□□□□□ -1.044e-10■□□□□ 10.7
LSM5-208ENST00000450169 PODNQ7Z5L7 613 aa8.53□□□□□ -1.04
LSM5-208ENST00000450169 ANKRD53Q8N9V6 530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms