RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 UGT1A7Q9HAW7 530 aa15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A10Q9HAW8 530 aa15.04■□□□□ -0
CHD3-205ENST00000449744 UGT1A8Q9HAW9 530 aa15.04■□□□□ -0
CHD3-205ENST00000449744 SLC39A1Q9NY26 324 aa15.04■□□□□ -0
CHD3-205ENST00000449744 PDP2Q9P2J9 529 aa15.04■□□□□ -0
CHD3-205ENST00000449744 LOC400499M0QZD8 3231 aa15.03■□□□□ -0
CHD3-205ENST00000449744 STMND1H3BQB6 276 aa15.03■□□□□ -0
CHD3-205ENST00000449744 KCNJ13O60928 360 aa15.03■□□□□ -0
CHD3-205ENST00000449744 PRB1P04280 392 aa15.03■□□□□ -0
CHD3-205ENST00000449744 AMD1P17707 334 aa15.03■□□□□ -0
CHD3-205ENST00000449744 LPOP22079 712 aaPredicted RBP15.03■□□□□ -0
CHD3-205ENST00000449744 RPL10P27635 214 aaKnown RBP15.03■□□□□ -0
CHD3-205ENST00000449744 CDC25BP30305 580 aa15.03■□□□□ -0
CHD3-205ENST00000449744 HALP42357 657 aa15.03■□□□□ -0
CHD3-205ENST00000449744 UBE2IP63279 158 aaKnown RBP15.03■□□□□ -0
CHD3-205ENST00000449744 TAF1AQ15573 450 aaPredicted RBP15.03■□□□□ -0
CHD3-205ENST00000449744 ABRAXAS1Q6UWZ7 409 aa15.03■□□□□ -0
CHD3-205ENST00000449744 TMEM26Q6ZUK4 368 aa15.03■□□□□ -0
CHD3-205ENST00000449744 PLXDC1Q8IUK5 500 aa15.03■□□□□ -0
CHD3-205ENST00000449744 TMEM139Q8IV31 216 aa15.03■□□□□ -0
CHD3-205ENST00000449744 DDHD1Q8NEL9 900 aa15.03■□□□□ -0
CHD3-205ENST00000449744 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
CHD3-205ENST00000449744 CXorf40BQ96DE9 158 aa15.03■□□□□ -0
CHD3-205ENST00000449744 GORASP1Q9BQQ3 440 aa15.03■□□□□ -0
CHD3-205ENST00000449744 DESI2Q9BSY9 194 aa15.03■□□□□ -0
CHD3-205ENST00000449744 ASPSCR1Q9BZE9 553 aa15.03■□□□□ -0
CHD3-205ENST00000449744 UCK1Q9HA47 277 aa15.03■□□□□ -0
CHD3-205ENST00000449744 POT1Q9NUX5 634 aa15.03■□□□□ -0
CHD3-205ENST00000449744 OCIAD1Q9NX40 245 aa15.03■□□□□ -0
CHD3-205ENST00000449744 SCHIP1Q9P0W5 487 aaPredicted RBP15.03■□□□□ -0
CHD3-205ENST00000449744 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
CHD3-205ENST00000449744 KLHL3Q9UH77 587 aa15.03■□□□□ -0
CHD3-205ENST00000449744 PACSIN2Q9UNF0 486 aaPredicted RBP15.03■□□□□ -0
CHD3-205ENST00000449744 PCDHGA3Q9Y5H0 932 aa15.03■□□□□ -0
CHD3-205ENST00000449744 ARL5AQ9Y689 179 aa15.03■□□□□ -0
CHD3-205ENST00000449744 C5orf60A6NFR6 353 aa15.02■□□□□ -0
CHD3-205ENST00000449744 B4E171 279 aa15.02■□□□□ -0
CHD3-205ENST00000449744 POP7O75817 140 aaKnown RBP15.02■□□□□ -0
CHD3-205ENST00000449744 CRTAMO95727 393 aa15.02■□□□□ -0
CHD3-205ENST00000449744 FTCDO95954 541 aa15.02■□□□□ -0
CHD3-205ENST00000449744 MSH3P20585 1137 aa15.02■□□□□ -0
CHD3-205ENST00000449744 AKT1P31749 480 aa15.02■□□□□ -0
CHD3-205ENST00000449744 SLC19A1P41440 591 aa15.02■□□□□ -0
CHD3-205ENST00000449744 TSPAN7P41732 249 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ATP1A2P50993 1020 aa15.02■□□□□ -0
CHD3-205ENST00000449744 DRG2P55039 364 aaKnown RBP15.02■□□□□ -0
CHD3-205ENST00000449744 RAB15P59190 212 aa15.02■□□□□ -0
CHD3-205ENST00000449744 PTPRCAPQ14761 206 aa15.02■□□□□ -0
CHD3-205ENST00000449744 LONRF2Q1L5Z9 754 aa15.02■□□□□ -0
CHD3-205ENST00000449744 DCAF12Q5T6F0 453 aa15.02■□□□□ -0
CHD3-205ENST00000449744 GPRC6AQ5T6X5 926 aa15.02■□□□□ -0
CHD3-205ENST00000449744 KIAA1614Q5VZ46 1190 aa15.02■□□□□ -0
CHD3-205ENST00000449744 WASH2PQ6VEQ5 465 aa15.02■□□□□ -0
CHD3-205ENST00000449744 RANBP10Q6VN20 620 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ARHGEF18Q6ZSZ5 1173 aa15.02■□□□□ -0
CHD3-205ENST00000449744 AMZ2Q86W34 360 aa15.02■□□□□ -0
CHD3-205ENST00000449744 DTX1Q86Y01 620 aa15.02■□□□□ -0
CHD3-205ENST00000449744 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ZSCAN1Q8NBB4 408 aa15.02■□□□□ -0
CHD3-205ENST00000449744 OR4K2Q8NGD2 314 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ZNF398Q8TD17 642 aa15.02■□□□□ -0
CHD3-205ENST00000449744 WBP1Q96G27 269 aa15.02■□□□□ -0
CHD3-205ENST00000449744 DDA1Q9BW61 102 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ASB8Q9H765 288 aa15.02■□□□□ -0
CHD3-205ENST00000449744 WASH6PQ9NQA3 447 aa15.02■□□□□ -0
CHD3-205ENST00000449744 ZNF624Q9P2J8 865 aaPredicted RBP15.02■□□□□ -0
CHD3-205ENST00000449744 OR2AG2A6NM03 316 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 GPR39O43194 453 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 EFSO43281 561 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 UBXN7O94888 489 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 PRAMEF1O95521 474 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 TYRP1P17643 537 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 ADRA1AP35348 466 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 PDE1BQ01064 536 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 SRSF6Q13247 344 aaKnown RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 OLIG2Q13516 323 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 AGAP9Q5VTM2 703 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 TMEM220Q6QAJ8 160 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 ARHGAP22Q7Z5H3 698 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 C11orf96Q7Z7L8 435 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 VASH2Q86V25 355 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 RBM12BQ8IXT5 1001 aaKnown RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 JPH3Q8WXH2 748 aaPredicted RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 SGF29Q96ES7 293 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 ZNF514Q96K75 400 aaPredicted RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 TEFMQ96QE5 360 aaKnown RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 TBL1YQ9BQ87 522 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 SMOXQ9NWM0 555 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 FEZ2Q9UHY8 353 aaPredicted RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 B3GALT1Q9Y5Z6 326 aa15.01□□□□□ -0.01
CHD3-205ENST00000449744 DNMT3AQ9Y6K1 912 aaPredicted RBP15.01□□□□□ -0.01
CHD3-205ENST00000449744 PRR19A6NJB7 356 aa15□□□□□ -0.01
CHD3-205ENST00000449744 OR52A4PA6NMU1 304 aa15□□□□□ -0.01
CHD3-205ENST00000449744 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
CHD3-205ENST00000449744 SRP72O76094 671 aaKnown RBP15□□□□□ -0.01
CHD3-205ENST00000449744 BRAFP15056 766 aa15□□□□□ -0.01
CHD3-205ENST00000449744 PBLDP30039 288 aaPredicted RBP15□□□□□ -0.01
CHD3-205ENST00000449744 CTSCP53634 463 aa15□□□□□ -0.01
CHD3-205ENST00000449744 SPARCL1Q14515 664 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms