RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 C9J4A7 227 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 BIN1O00499 593 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 CLDN14O95500 239 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 RORAP35398 523 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 CA7P43166 264 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 RENBPP51606 427 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 GPR18Q14330 331 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 PLCL1Q15111 1095 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 PTPRRQ15256 657 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 CCDC14Q49A88 953 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 C2CD6Q53TS8 623 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 TMTC4Q5T4D3 741 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 ZNF324BQ6AW86 544 aaPredicted RBP12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 IGFL2Q6UWQ7 119 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 RBM12BQ8IXT5 1001 aaKnown RBP12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 SYTL1Q8IYJ3 562 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 PYROXD2Q8N2H3 581 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 ZNF501Q96CX3 271 aaPredicted RBP12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 RIOK2Q9BVS4 552 aaKnown RBP12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 LRRC19Q9H756 370 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 POT1Q9NUX5 634 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 P4HTMQ9NXG6 502 aa12.31□□□□□ -0.44
AC004540.1-204ENST00000449537 UBA6A0AVT1 1052 aaPredicted RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 FAM170AA1A519 330 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 TTC24A2A3L6 582 aaPredicted RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 ARHGAP42A6NI28 874 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 MASP2O00187 686 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 SOCS5O75159 536 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 GNA14O95837 355 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 SDC4P31431 198 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 TDGF1P3P51864 188 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 IST1P53990 364 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CASP6P55212 293 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CSNK1G2P78368 415 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 PTSQ03393 145 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 RFTN1Q14699 578 aaPredicted RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 AGAP7PQ5VUJ5 663 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 RPUSD3Q6P087 351 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 KLHL35Q6PF15 583 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 STRADAQ7RTN6 431 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 SLFN11Q7Z7L1 901 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 RXFP2Q8WXD0 754 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 AGAP4Q96P64 663 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 FOXC2Q99958 501 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 DHRS4Q9BTZ2 278 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 ENKD1Q9H0I2 346 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 TSPY26PQ9H489 355 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 SH3BGRL2Q9UJC5 107 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CNOT6Q9ULM6 557 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CACNA1CQ13936 2221 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 JMJD1CQ15652 2540 aa12.3□□□□□ -0.44
AC004540.1-204ENST00000449537 CCDC78A2IDD5 438 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 PDZK1P1A8MUH7 402 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 NUAK1O60285 661 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 AGXTP21549 392 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 DNAJA1P31689 397 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 TPM4P67936 248 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 MYL5Q02045 173 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 AIMP2Q13155 320 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 PTCHD3Q3KNS1 767 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 DNTTIP2Q5QJE6 756 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 TRIM72Q6ZMU5 477 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 USP45Q70EL2 814 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 MSANTD4Q8NCY6 345 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 ENOX1Q8TC92 643 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 NR4A3Q92570 626 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 NTAN1Q96AB6 310 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CXorf40BQ96DE9 158 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CELF6Q96J87 481 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 MCCC1Q96RQ3 725 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CD180Q99467 661 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 DPH2Q9BQC3 489 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CARD9Q9H257 536 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 PCMTD2Q9NV79 361 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 RPH3AQ9Y2J0 694 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-204ENST00000449537 CCDC88CQ9P219 2028 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 TLCD2A6NGC4 264 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 UNC5CO95185 931 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 ZBTB11O95625 1053 aaPredicted RBP12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 C8BP07358 591 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 CTPS1P17812 591 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 ZNF165P49910 485 aa12.28□□□□□ -0.44
AC004540.1-204ENST00000449537 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms