RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF438Q7Z4V0 828 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TCAIMQ8N3R3 496 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PRKD2Q9BZL6 878 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 IARS2Q9NSE4 1012 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 CD300AQ9UGN4 299 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 VPS4AQ9UN37 437 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 CHRNA1P02708 482 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 IMPDH1P20839 514 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 CFL1P23528 166 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 IL12AP29459 219 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 NAGLUP54802 743 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 DSTNP60981 165 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 B2MP61769 119 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 OR13J1Q8NGT2 312 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATXN7L3BQ96GX2 97 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZIC5Q96T25 663 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 UQCC2Q9BRT2 126 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ALOXE3Q9BYJ1 711 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TBC1D13Q9NVG8 400 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 MTMR10Q9NXD2 777 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 SAGE2PA6NJ88 616 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRIM77I1YAP6 450 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 KPNA6O60684 536 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 HUS1O60921 280 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TAF6P49848 677 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIGFQ07326 219 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZIK1Q3SY52 487 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 CMC1Q7Z7K0 106 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PHF10Q8WUB8 498 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 CCDC120Q96HB5 630 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 FZD10Q9ULW2 581 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
SYNGAP1-204ENST00000449372 TYW5A2RUC4 315 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 AXIN1O15169 862 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 SNX2O60749 519 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 INMTO95050 263 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 SNRPB2P08579 225 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 GOT1P17174 413 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 CRHBPP24387 322 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 ADORA2BP29275 332 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 CYP2C18P33260 490 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 HTR3AP46098 478 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 VBP1P61758 197 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 ADARB1P78563 741 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 FASTKQ14296 549 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 ARL13AQ5H913 290 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 PITRM1Q5JRX3 1037 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 TMEM135Q86UB9 458 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 HDAC10Q969S8 669 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 GPR22Q99680 433 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 CACNA2D2Q9NY47 1150 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 NPAP1Q9NZP6 1156 aa13.33□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATP6V1G2-DDX39BF2Z307 99 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 SH3BP5O60239 455 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 HOXB8P17481 243 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 HCAR3P49019 387 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 HACD2Q6Y1H2 254 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 SERINC5Q86VE9 423 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 ROPN1LQ96C74 230 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 LGMNQ99538 433 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 GMPR2Q9P2T1 348 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 NUDT5Q9UKK9 219 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 SNX5Q9Y5X3 404 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 NLRC5Q86WI3 1866 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 ARPC4-TTLL3A0A0A6YYG9 625 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 PEX14O75381 377 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 GEMP55040 296 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 CRADDP78560 199 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■■□ 23.6
SYNGAP1-204ENST00000449372 SV2CQ496J9 727 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM131BQ86XD5 332 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 HID1Q8IV36 788 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 MUL1Q969V5 352 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC45A3Q96JT2 553 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 CASS4Q9NQ75 786 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 DIABLOQ9NR28 239 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms