RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GRIN3AQ8TCU5 1115 aa14.64□□□□□ -0.07
SF1-211ENST00000448404 PPP2R3CQ969Q6 453 aa14.64□□□□□ -0.07
SF1-211ENST00000448404 SPAG4Q9NPE6 437 aa14.64□□□□□ -0.07
SF1-211ENST00000448404 INTS10Q9NVR2 710 aaKnown RBP14.64□□□□□ -0.07
SF1-211ENST00000448404 PKP3Q9Y446 797 aa14.64□□□□□ -0.07
SF1-211ENST00000448404 SLC30A1Q9Y6M5 507 aa14.64□□□□□ -0.07
SF1-211ENST00000448404 FXYD1O00168 92 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 ZNF821O75541 412 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 ATP6V1B1P15313 513 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 NFKB2Q00653 900 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 STX5Q13190 355 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 CHRNA6Q15825 494 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 PTRHD1Q6GMV3 140 aaKnown RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 GALNT7Q86SF2 657 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 APLFQ8IW19 511 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 PPWD1Q96BP3 646 aaKnown RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 GBP5Q96PP8 586 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 SYTL2Q9HCH5 934 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 PAK6Q9NQU5 681 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 ABCB8Q9NUT2 735 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 INTS7Q9NVH2 962 aaKnown RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 ELOVL2Q9NXB9 296 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 NUP214P35658 2090 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 CEP290O15078 2479 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 MYO9BQ13459 2157 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 COL4A6Q14031 1691 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 MICAL3Q7RTP6 2002 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 C7orf72A4D263 438 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 NPIPB15A6NHN6 443 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 PDLIM1O00151 329 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 E2F3O00716 465 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 OXTRP30559 389 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 DGKQP52824 942 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 CMPK2Q5EBM0 449 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 ASTLQ6HA08 431 aaPredicted RBP14.63□□□□□ -0.07
SF1-211ENST00000448404 ADGRG6Q86SQ4 1221 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 NAT16Q8N8M0 369 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 PIP4K2CQ8TBX8 421 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 TOP1MTQ969P6 601 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 FAR2Q96K12 515 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 COQ10BQ9H8M1 238 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 CMTM6Q9NX76 183 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 SPEGQ15772 3267 aa14.63□□□□□ -0.07
SF1-211ENST00000448404 SAC3D1A6NKF1 404 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 RSL1D1O76021 490 aaKnown RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC25A14O95258 325 aaPredicted RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 CAPN1P07384 714 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 RPS17P08708 135 aaKnown RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 BPIP17213 487 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 EPHB3P54753 998 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 ZNF648Q5T619 568 aaPredicted RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 ZNF697Q5TEC3 545 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 HMBOX1Q6NT76 420 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 KLHDC10Q6PID8 442 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 CHST9Q7L1S5 443 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 RALGPS2Q86X27 583 aaPredicted RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 HERC6Q8IVU3 1022 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 MYO1HQ8N1T3 1032 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 MIER2Q8N344 545 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 TMEM102Q8N9M5 508 aaPredicted RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 RHEBL1Q8TAI7 183 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC25A23Q9BV35 468 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 ZNHIT2Q9UHR6 403 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 AP4B1Q9Y6B7 739 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 C15orf38-AP3S2A0A0A6YYH1 394 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 PRSS51A0A1B0GVH4 220 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 PLOD2O00469 737 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 FZD6O60353 706 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 PGLSO95336 258 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 TTPAP49638 278 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 ARPINQ7Z6K5 226 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC15A3Q8IY34 581 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC22A15Q8IZD6 547 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 FNDC5Q8NAU1 212 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 GPR26Q8NDV2 337 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 CLHC1Q8NHS4 586 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 CDK5RAP1Q96SZ6 601 aaKnown RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 YME1L1Q96TA2 773 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 TRMOQ9BU70 441 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 ZFYVE1Q9HBF4 777 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 MRPL17Q9NRX2 175 aaKnown RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 ANGPT2O15123 496 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 B3GALT4O96024 378 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 LBPP18428 481 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 HMGCS1Q01581 520 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC2A7Q6PXP3 512 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 IL27RAQ6UWB1 636 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
SF1-211ENST00000448404 Q6ZSR9 355 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 FRA10AC1Q70Z53 315 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SATL1Q86VE3 508 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 FOXJ1Q92949 421 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 EME1Q96AY2 570 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 ASB9Q96DX5 294 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 TRAPPC9Q96Q05 1148 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 SLC46A2Q9BY10 475 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 LINC00597Q9H2U6 94 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 AP4S1Q9Y587 144 aa14.62□□□□□ -0.07
SF1-211ENST00000448404 PLXNA4Q9HCM2 1894 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 ZBBXA8MT70 800 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms