RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 GSPT2Q8IYD1 628 aaKnown RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 PIANPQ8IYJ0 282 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 PHACTR4Q8IZ21 702 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 RHBDD1Q8TEB9 315 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 SETD7Q8WTS6 366 aaKnown RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 TSACCQ96A04 125 aaPredicted RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 WDR83Q9BRX9 315 aaKnown RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 TSSK1BQ9BXA7 367 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 CCDC68Q9H2F9 335 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 LRRC4CQ9HCJ2 640 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 FGF22Q9HCT0 170 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 GPR27Q9NS67 375 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 NSMCE4AQ9NXX6 385 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 NINJ2Q9NZG7 142 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 IL1RAPL1Q9NZN1 696 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 MARCH4Q9P2E8 410 aaPredicted RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ATXN10Q9UBB4 475 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 SPASTQ9UBP0 616 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 FBXO5Q9UKT4 447 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 TMPRSS11EQ9UL52 423 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 SUFUQ9UMX1 484 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 OAS3Q9Y6K5 1087 aaKnown RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 CEP192Q8TEP8 1941 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 TCRBV9S1A1TA0A576 114 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 KMOO15229 486 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 GRID2O43424 1007 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 NUAK1O60285 661 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 ERLIN1O75477 346 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 AP2A2O94973 939 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 ACSL3O95573 720 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CSF2P04141 144 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 FAM153BP0C7A2 387 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 OR56A5P0C7T3 313 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 NME1P15531 152 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 HK3P52790 923 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 ILF2Q12905 390 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 ILF3Q12906 894 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 EIF2B5Q13144 721 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CTBP1Q13363 440 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 SHBQ15464 509 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 FAM153CQ494X1 144 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 PRAMEF14Q5SWL7 426 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 TPRG1LQ5T0D9 272 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 PTRHD1Q6GMV3 140 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 TRMT10BQ6PF06 316 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 TMEM220Q6QAJ8 160 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CRTC3Q6UUV7 619 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 KIAA0408Q6ZU52 694 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CYS1Q717R9 158 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 LDB1Q86U70 411 aaPredicted RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 LRRTM4Q86VH4 590 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CILP2Q8IUL8 1156 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 UNC5BQ8IZJ1 945 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 RASGEF1AQ8N9B8 481 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 SAP25Q8TEE9 199 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 FBF1Q8TES7 1133 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 OR1E3Q8WZA6 343 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 SGF29Q96ES7 293 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 OR2M4Q96R27 311 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CYTH2Q99418 400 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CCDC77Q9BR77 488 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 MRPL40Q9NQ50 206 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 INTS10Q9NVR2 710 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 APOBEC3BQ9UH17 382 aaKnown RBP11.43□□□□□ -0.58
LINC00408-201ENST00000447784 GPR34Q9UPC5 381 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 DGKBQ9Y6T7 804 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 SHROOM3Q8TF72 1996 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 GON4LQ3T8J9 2241 aa11.43□□□□□ -0.58
LINC00408-201ENST00000447784 NUMA1Q14980 2115 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 A0A087WUV0 522 aaPredicted RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 NEMP2A6NFY4 417 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 H3BMM5 538 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 PRMT5O14744 637 aaPredicted RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 FTH1P02794 183 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 EPHA8P29322 1005 aaPredicted RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 CA5AP35218 305 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 SLC1A2P43004 574 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 EIF3BP55884 814 aaKnown RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 GPX6P59796 221 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 FOXC1Q12948 553 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 NAB1Q13506 487 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 LRP8Q14114 963 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 SEMA3AQ14563 771 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 ELOCQ15369 112 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 INSCQ1MX18 579 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 TYSND1Q2T9J0 566 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 KHDC1Q4VXA5 237 aaKnown RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 TEDDM1Q5T9Z0 273 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 PACS1Q6VY07 963 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 CHST15Q7LFX5 561 aaPredicted RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 DENND6AQ8IWF6 608 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 FSTL5Q8N475 847 aaPredicted RBP11.42□□□□□ -0.58
LINC00408-201ENST00000447784 CLDN19Q8N6F1 224 aa11.42□□□□□ -0.58
LINC00408-201ENST00000447784 LMX1AQ8TE12 382 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms