RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PDHXO00330 501 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 SLC9A3R1O14745 358 aaPredicted RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 UGT2B17O75795 530 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 MATN4O95460 622 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 SLC4A1P02730 911 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 STMN1P16949 149 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 CFL1P23528 166 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 GSK3BP49841 420 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 UGT2B15P54855 530 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 AMHR2Q16671 573 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 PLA2G4EQ3MJ16 856 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 Q5BKY6 102 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 ZC3H12BQ5HYM0 836 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 LARP4Q71RC2 724 aaKnown RBP eCLIP19■□□□□ 0.636e-11■□□□□ 11.3
HMGA1-205ENST00000447654 ZDHHC13Q8IUH4 622 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 TMBIM1Q969X1 311 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 MOCOSQ96EN8 888 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 MBOAT4Q96T53 435 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 ALG2Q9H553 416 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 SIX4Q9UIU6 781 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 TRAPPC4Q9Y296 219 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 PCDHGB2Q9Y5G2 931 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 A0A087WZ62 844 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 A0A0J9YYE9 177 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 C2CD4BA6NLJ0 364 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 GOT2P00505 430 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 VTNP04004 478 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 PRKACAP17612 351 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 ATP5F1P24539 256 aaPredicted RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 HTR1EP28566 365 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 RFX4Q33E94 735 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 LETMD1Q6P1Q0 360 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 CNSTQ6PJW8 725 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 LURAP1LQ8IV03 231 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 GPRC5AQ8NFJ5 357 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 HTR3CQ8WXA8 447 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 GTF2H4Q92759 462 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 TMEM125Q96AQ2 219 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 TMEM80Q96HE8 168 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 RBM4BQ9BQ04 359 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 FDXACB1Q9BRP7 624 aaPredicted RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 TTYH2Q9BSA4 534 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 RBM4Q9BWF3 364 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 REXO4Q9GZR2 422 aaKnown RBP19■□□□□ 0.63
HMGA1-205ENST00000447654 ERAP1Q9NZ08 941 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 CYTH4Q9UIA0 394 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 HSPE1-MOB4S4R3N1 261 aa19■□□□□ 0.63
HMGA1-205ENST00000447654 ZFC3H1O60293 1989 aaKnown RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 KRT87PA6NCN2 255 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 ZBBXA8MT70 800 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 DPYSL4O14531 572 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SLC16A6O15403 523 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 NFICP08651 508 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 GLULP15104 373 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 CHRM3P20309 590 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 GTF2E2P29084 291 aaKnown RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 ALDH4A1P30038 563 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SERPINH1P50454 418 aaKnown RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 LSM3P62310 102 aaKnown RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 PIGFQ07326 219 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SEMA3BQ13214 749 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 ORC1Q13415 861 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 PIK3R6Q5UE93 754 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 CREB3L2Q70SY1 520 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 STK32CQ86UX6 486 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 DEPDC4Q8N2C3 294 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 MCOLN3Q8TDD5 553 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 PPP1R13LQ8WUF5 828 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SNAPC3Q92966 411 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 NCLNQ969V3 563 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 BIRC7Q96CA5 298 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 CPB2Q96IY4 423 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 FCRL3Q96P31 734 aaPredicted RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF304Q9HCX3 659 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 EHD3Q9NZN3 535 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 RWDD3Q9Y3V2 267 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 PCDHGA10Q9Y5H3 936 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 ASB14A6NK59 587 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 PLK4O00444 970 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SNAI1O95863 264 aaPredicted RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 RAP2AP10114 183 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 TALDO1P37837 337 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 HCAR3P49019 387 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 CDH8P55286 799 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 TIGD3Q6B0B8 471 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 SPATC1Q76KD6 591 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 LINC01465Q8N7H1 131 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 COLGALT1Q8NBJ5 622 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 HSFY1Q96LI6 401 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 GAD1Q99259 594 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 C16orf70Q9BSU1 422 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 TRMOQ9BU70 441 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 RHOJQ9H4E5 214 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 XPR1Q9UBH6 696 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 EIF3KQ9UBQ5 218 aaKnown RBP18.99■□□□□ 0.63
HMGA1-205ENST00000447654 TJP2Q9UDY2 1190 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 STOML2Q9UJZ1 356 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 C3orf18Q9UK00 162 aa18.99■□□□□ 0.63
HMGA1-205ENST00000447654 GLTPD2A6NH11 291 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms