RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TCHHL1Q5QJ38 904 aaPredicted RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 TRIM68Q6AZZ1 485 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 MACC1Q6ZN28 852 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 FBXW8Q8N3Y1 598 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 MTIF3Q9H2K0 278 aaKnown RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 MTG2Q9H4K7 406 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 STX18Q9P2W9 335 aaKnown RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 GPC4O75487 556 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 CYP17A1P05093 508 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 PTPN5P54829 565 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 DHCR24Q15392 516 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 GPRC6AQ5T6X5 926 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 SYVN1Q86TM6 617 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMC6-206ENST00000446852 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 NPAS2Q99743 824 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 SLC2A11Q9BYW1 496 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 NUDT4Q9NZJ9 180 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 PACSIN3Q9UKS6 424 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 POMPQ9Y244 141 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 BTRCQ9Y297 605 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 PSMD12O00232 456 aaPredicted RBP17.23■□□□□ 0.35
SMC6-206ENST00000446852 B4GALNT1Q00973 533 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 FASTKQ14296 549 aaKnown RBP17.23■□□□□ 0.35
SMC6-206ENST00000446852 C18orf21Q32NC0 220 aaPredicted RBP17.23■□□□□ 0.35
SMC6-206ENST00000446852 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 ADAMTSL2Q86TH1 951 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 PHYKPLQ8IUZ5 450 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 DDIASQ8IXT1 998 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 SMG7Q92540 1137 aaKnown RBP17.23■□□□□ 0.35
SMC6-206ENST00000446852 HGH1Q9BTY7 390 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 ZMYM5Q9UJ78 669 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 FBXO10Q9UK96 956 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 ADAMTS6Q9UKP5 1117 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 TMCO1Q9UM00 188 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 TIMM22Q9Y584 194 aa17.23■□□□□ 0.35
SMC6-206ENST00000446852 VIPR2P41587 438 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 DPP6P42658 865 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 SLC34A1Q06495 639 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 GPM6BQ13491 265 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CCNIQ14094 377 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CCDC6Q16204 474 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 C16orf89Q6UX73 402 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 FRA10AC1Q70Z53 315 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 C12orf40Q86WS4 652 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 PLPP6Q8IY26 295 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 ZBTB2Q8N680 514 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CELF5Q8N6W0 485 aaKnown RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 OR9I1Q8NGQ6 314 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CCDC167Q9P0B6 97 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 STOML1Q9UBI4 398 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CD84Q9UIB8 345 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 TMPRSS11EQ9UL52 423 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CEP290O15078 2479 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 TCF20Q9UGU0 1960 aaKnown RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 SLC9A3R1O14745 358 aaPredicted RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 LEFTY1O75610 366 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 ESRRBO95718 433 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CTSLP07711 333 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 POU2F2P09086 479 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 LINC00032P0C843 101 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 ENO3P13929 434 aaPredicted RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 SPINT3P49223 89 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 GRB7Q14451 532 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 AGKQ53H12 422 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 TMC5Q6UXY8 1006 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 HEPHQ9BQS7 1158 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 EFCAB1Q9HAE3 211 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
SMC6-206ENST00000446852 ZDHHC3Q9NYG2 299 aa17.22■□□□□ 0.35
SMC6-206ENST00000446852 CISD3P0C7P0 127 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 NSG1P42857 185 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 MESP2Q0VG99 397 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 RBBP7Q16576 425 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 BRAT1Q6PJG6 821 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 PGAM4Q8N0Y7 254 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 DCBLD1Q8N8Z6 715 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 OR52B6Q8NGF0 335 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 CERS4Q9HA82 394 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 WDR41Q9HAD4 459 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 MRGBPQ9NV56 204 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 POLG2Q9UHN1 485 aa17.21■□□□□ 0.35
SMC6-206ENST00000446852 MBD1Q9UIS9 605 aaPredicted RBP17.21■□□□□ 0.35
SMC6-206ENST00000446852 PRPF19Q9UMS4 504 aaKnown RBP17.21■□□□□ 0.35
SMC6-206ENST00000446852 FBP2O00757 339 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 FFAR2O15552 330 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 MLYCDO95822 493 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 ADH5P11766 374 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 DGKAP23743 735 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 RGS4P49798 205 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 NAA20P61599 178 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 POLR2LP62875 67 aaKnown RBP17.21■□□□□ 0.34
SMC6-206ENST00000446852 ZRSR2Q15696 482 aaKnown RBP17.21■□□□□ 0.34
SMC6-206ENST00000446852 ARSIQ5FYB1 569 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 MYO1HQ8N1T3 1032 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 ZNF366Q8N895 744 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 OR56A4Q8NGH8 313 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms