RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NELL1Q92832 810 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 MROQ9BYG7 248 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 AGAP5A6NIR3 686 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PRMT5O14744 637 aaPredicted RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 CD86P42081 329 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CRAMP1Q96RY5 1269 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SORBS2O94875 1100 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 SP8Q8IXZ3 490 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZC3H10Q96K80 434 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 PTGFRNQ9P2B2 879 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 FFAR3O14843 346 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 GPR42O15529 346 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CRATP43155 626 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 NCS1P62166 190 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZPBP2Q6X784 338 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CAMKK2Q96RR4 588 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 KLHL1Q9NR64 748 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ENPP5Q9UJA9 477 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZNF135P52742 658 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 DNAJC11Q9NVH1 559 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CSADQ9Y600 493 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 TPPPO94811 219 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 TNNI3P19429 210 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 VEPH1Q14D04 833 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SLC35G1Q2M3R5 365 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PIWIL3Q7Z3Z3 882 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 XYLT1Q86Y38 959 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CMTR2Q8IYT2 770 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 FARSBQ9NSD9 589 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZNF358Q9NW07 568 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 MAP3K20Q9NYL2 800 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 ENTPD3O75355 529 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 SAV1Q9H4B6 383 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 MYPNQ86TC9 1320 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SPCS2Q15005 226 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CADM2Q8N3J6 435 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 NETO2Q8NC67 525 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 MUS81Q96NY9 551 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CORO2BQ9UQ03 480 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 GSAPA4D1B5 854 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CDH4P55283 916 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 NUSAP1Q9BXS6 441 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 DSN1Q9H410 356 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 GRIP1Q9Y3R0 1128 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 WTIPA6NIX2 430 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 SYTL3Q4VX76 610 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SIAEQ9HAT2 523 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ABCC6O95255 1503 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SLC30A4O14863 429 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ERN1O75460 977 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 TFAP2AP05549 437 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 AQP1P29972 269 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 BEX2Q9BXY8 128 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 MEAF6Q9HAF1 191 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 KRCC1Q9NPI7 259 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 MKS1Q9NXB0 559 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 LYVE1Q9Y5Y7 322 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 H7C2Y5 167 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 hCG_2039718K7EN88 272 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PIK3CGP48736 1102 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 TKTL1P51854 596 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PGBD2Q6P3X8 592 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 MFSD3Q96ES6 412 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SNX6Q9UNH7 406 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SHANK1Q9Y566 2161 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 LRATO95237 230 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 SPATA2LQ8IUW3 424 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 DEFB106AQ8N104 65 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PQLC3Q8N755 202 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 TCF25Q9BQ70 676 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 UCK2Q9BZX2 261 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 APOBEC3GQ9HC16 384 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 TRPC4Q9UBN4 977 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZBTB14O43829 449 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 DNAJA1P31689 397 aaKnown RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 ADRA1BP35368 520 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PMF1Q6P1K2 205 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 RANBP3Q9H6Z4 567 aaPredicted RBP7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZFP14Q9HCL3 533 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 OTCP00480 354 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 CSF2P04141 144 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 FABP3P05413 133 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 PTPN3P26045 913 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 ZNF367Q7RTV3 350 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 STX12Q86Y82 276 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 AMBNQ9NP70 447 aa7.8□□□□□ -1.16
SMG1-202ENST00000446231 HBP1O60381 514 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 METTL18O95568 372 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CLCQ05315 142 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SEMA5AQ13591 1074 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SPPL2BQ8TCT7 592 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ITPAQ9BY32 194 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 PREX2Q70Z35 1606 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 UQCRC1P31930 480 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms