RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 KDM4BO94953 1096 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 IFNA6P05013 189 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 LPOP22079 712 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-203ENST00000445220 PTX3P26022 381 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-203ENST00000445220 ENTPD1P49961 510 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 AIF1P55008 147 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 XKR5Q6UX68 686 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 MON1BQ7L1V2 547 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 PHC2Q8IXK0 858 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 ANKHQ9HCJ1 492 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 UCKL1Q9NWZ5 548 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 IRF6O14896 467 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 SLC28A2O43868 658 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 NUDT14O95848 222 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 TAS2R41P59536 307 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 LCP2Q13094 533 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 PABPC1LQ4VXU2 614 aaKnown RBP18.46■□□□□ 0.55
SHANK3-203ENST00000445220 TPRG1LQ5T0D9 272 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 TMEM53Q6P2H8 277 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 USP30Q70CQ3 517 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 CLHC1Q8NHS4 586 aa18.46■□□□□ 0.55
SHANK3-203ENST00000445220 RCOR3Q9P2K3 495 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-203ENST00000445220 CHURC1-FNTBB4DL54 471 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 WNT7AO00755 349 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 MSCO60682 206 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 OGNP20774 298 aaKnown RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SLC6A4P31645 630 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 RPL9P32969 192 aaKnown RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 GRM5P41594 1212 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 CDK18Q07002 472 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 OAFQ86UD1 273 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 FCRL4Q96PJ5 515 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 MRPL45Q9BRJ2 306 aaKnown RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 PCDHAC1Q9H158 963 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SLC6A15Q9H2J7 730 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ACOX3O15254 700 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 FOSL2P15408 326 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 XRCC1P18887 633 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 TBATAQ96M53 351 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SYNDIG1Q9H7V2 258 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 CCDC177Q9NQR7 707 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 EMC3Q9P0I2 261 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 DERAQ9Y315 318 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 TIMM22Q9Y584 194 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 APOL3O95236 402 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ABL2P42684 1182 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 MRPS6P82932 125 aaKnown RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 BTG3Q14201 252 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ACAP2Q15057 778 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ZDHHC21Q8IVQ6 265 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF420Q8TAQ5 688 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 CAMTA1Q9Y6Y1 1673 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 TRBC1P01850 177 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SMIM10L2AP0DMW4 78 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SMIM10L2BP0DMW5 78 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 COL6A1P12109 1028 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 CD83Q01151 205 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 HEXDCQ8WVB3 486 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 PGLYRP2Q96PD5 576 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 SLC39A8Q9C0K1 460 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF490Q9ULM2 529 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-203ENST00000445220 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
SHANK3-203ENST00000445220 NOBOXO60393 691 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 SLC18A2Q05940 514 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 NPTX1Q15818 432 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 COPS5Q92905 334 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 ZYG11BQ9C0D3 744 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 GLOD4Q9HC38 313 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 CXCR6O00574 342 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 SCNN1GP51170 649 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 GNG2P59768 71 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 RFTN2Q52LD8 501 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 TEX44Q53QW1 395 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 PITRM1Q5JRX3 1037 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 FSTL4Q6MZW2 842 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 SLC4A11Q8NBS3 891 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 COL1A2P08123 1366 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 METTL21EPA6NDL7 271 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 ITM2AO43736 263 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 LRCH4O75427 683 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF432O94892 652 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 IFNW1P05000 195 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 PTGES3Q15185 160 aaKnown RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 SFT2D3Q587I9 215 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 DEFB128Q7Z7B8 93 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 DAW1Q8N136 415 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 C9orf43Q8TAL5 461 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 CSPG4P5Q96PW8 444 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 LIN28AQ9H9Z2 209 aaKnown RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 OAZ3Q9UMX2 235 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 PRKAB1Q9Y478 270 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 PLOD2O00469 737 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 UROSP10746 265 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 PRKAR2AP13861 404 aaKnown RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 ATP5C1P36542 298 aaKnown RBP18.44■□□□□ 0.54
SHANK3-203ENST00000445220 SLC9A3P48764 834 aa18.44■□□□□ 0.54
SHANK3-203ENST00000445220 MAB21L1Q13394 359 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms