RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 FSHRP23945 695 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 NRIP1P48552 1158 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 ST8SIA6P61647 398 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 LARP4Q71RC2 724 aaKnown RBP eCLIP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 NPAS3Q8IXF0 933 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 OR56A4Q8NGH8 313 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 TWIST2Q8WVJ9 160 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 ASB16Q96NS5 453 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 NSUN5Q96P11 429 aaKnown RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 FAM126AQ9BYI3 521 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 PFDN4Q9NQP4 134 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 SMOXQ9NWM0 555 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 KCTD5Q9NXV2 234 aa18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 G3BP2Q9UN86 482 aaKnown RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
SEMA3D-202ENST00000444867 CCNT2O60583 730 aaKnown RBP18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 TULP3O75386 442 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 LEFTY1O75610 366 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 TRIM16O95361 564 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 KCNC3Q14003 757 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 PCBP2Q15366 365 aaKnown RBP eCLIP18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 ATP13A5Q4VNC0 1218 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 ZNF805Q5CZA5 627 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 ACSBG2Q5FVE4 666 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 ARSIQ5FYB1 569 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 FAM78AQ5JUQ0 283 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 PGM2L1Q6PCE3 622 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 SBSNQ6UWP8 590 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 ETFBKMTQ8IXQ9 262 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 CLDN19Q8N6F1 224 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 KYQ8NBH2 561 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 PDPRQ8NCN5 879 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 LKAAEAR1Q8TD35 194 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 WDR60Q8WVS4 1066 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 STMN2Q93045 179 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 SLC7A8Q9UHI5 535 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 PRPF19Q9UMS4 504 aaKnown RBP18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 OARD1Q9Y530 152 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 DNAJC15Q9Y5T4 150 aa18.62■□□□□ 0.57
SEMA3D-202ENST00000444867 NCF1BA6NI72 391 aaPredicted RBP18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 NCF1CA8MVU1 366 aaPredicted RBP18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 ESRRBO95718 433 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 OR56A5P0C7T3 313 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 NCF1P14598 390 aaPredicted RBP18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 TIMP2P16035 220 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 VIPR2P41587 438 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 PKNOX1P55347 436 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 SEMG2Q02383 582 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 SHHQ15465 462 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 KHDC1Q4VXA5 237 aaKnown RBP18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 TCEAL5Q5H9L2 206 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 CYHR1Q6ZMK1 362 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 DEFB107AQ8IZN7 70 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 CHCHD4Q8N4Q1 142 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 SORCS1Q8WY21 1168 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 HGH1Q9BTY7 390 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 TRPV4Q9HBA0 871 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 SEMA4BQ9NPR2 832 aaPredicted RBP18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 ELOVL2Q9NXB9 296 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 GDE1Q9NZC3 331 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 L3MBTL1Q9Y468 752 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 KIAA1549LQ6ZVL6 1849 aa18.61■□□□□ 0.57
SEMA3D-202ENST00000444867 GIPC1O14908 333 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 CRCPO75575 148 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 CHEK2O96017 543 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 UROSP10746 265 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 ENO3P13929 434 aaPredicted RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 ITGB6P18564 788 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 AGTR2P50052 363 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 ACTR3P61158 418 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 PDGFRLQ15198 375 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 PPP1R3AQ16821 1122 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 TRIM68Q6AZZ1 485 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 METTL2BQ6P1Q9 378 aaKnown RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 DPPA4Q7L190 304 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 MARK4Q96L34 752 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 ZNF382Q96SR6 550 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 CCT7Q99832 543 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 EFCAB1Q9HAE3 211 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 MUC22E2RYF6 1773 aaPredicted RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 E2F3O00716 465 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 PPP6CO00743 305 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 FFAR2O15552 330 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 PSMG1O95456 288 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 XPAP23025 273 aaPredicted RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 NUDT2P50583 147 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 TBL3Q12788 808 aaKnown RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 PTK2BQ14289 1009 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 EIF4HQ15056 248 aaKnown RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 RBBP7Q16576 425 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 GPRIN3Q6ZVF9 776 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 HOMEZQ8IX15 550 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 RAVER1Q8IY67 606 aaKnown RBP18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 MYLIPQ8WY64 445 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 FGF13Q92913 245 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 CLPTM1LQ96KA5 538 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 FAM83DQ9H4H8 585 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 EBF2Q9HAK2 575 aa18.6■□□□□ 0.57
SEMA3D-202ENST00000444867 RDH14Q9HBH5 336 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms