RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SNX20Q7Z614 316 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 AMZ2Q86W34 360 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 SLITRK4Q8IW52 837 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 DNAAF3Q8N9W5 541 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 OR52K1Q8NGK4 314 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 HEXDCQ8WVB3 486 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 KCNF1Q9H3M0 494 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 RDH14Q9HBH5 336 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 ASCL3Q9NQ33 180 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 THSD1Q9NS62 852 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 CRLS1Q9UJA2 301 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 SLC30A1Q9Y6M5 507 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 KLHL33A6NCF5 533 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 MROH6A6NGR9 719 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PLD2O14939 933 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 RALBP11234 206 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PSMA3P25788 255 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 RPL22P35268 128 aaKnown RBP18.32■□□□□ 0.52
CCDC188-202ENST00000444532 CTSCP53634 463 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 SEPT6Q14141 434 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 SKIDA1Q1XH10 827 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PPP1R21Q6ZMI0 780 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 GSTA5Q7RTV2 222 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 TMPRSS9Q7Z410 1059 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PRUNE1Q86TP1 453 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 NXPE1Q8N323 547 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 RASGEF1CQ8N431 466 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 FBXO39Q8N4B4 442 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 GLIS1Q8NBF1 620 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 OR4D9Q8NGE8 314 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 OR10G6Q8NH81 332 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 AHCYL2Q96HN2 611 aaKnown RBP18.32■□□□□ 0.52
CCDC188-202ENST00000444532 CDKN2AIPNLQ96HQ2 116 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PDLIM2Q96JY6 352 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 DNAJC1Q96KC8 554 aaKnown RBP18.32■□□□□ 0.52
CCDC188-202ENST00000444532 UCK1Q9HA47 277 aa18.32■□□□□ 0.52
CCDC188-202ENST00000444532 PIH1D1Q9NWS0 290 aaKnown RBP18.32■□□□□ 0.52
CCDC188-202ENST00000444532 URB1O60287 2271 aaKnown RBP18.32■□□□□ 0.52
CCDC188-202ENST00000444532 OR2AG2A6NM03 316 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 PDZK1P1A8MUH7 402 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 RRP8O43159 456 aaKnown RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 APRTP07741 180 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 ZSCAN5DPP0CG00 497 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 MC4RP32245 332 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 LIMK2P53671 638 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 EPHA4P54764 986 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 UBE2IP63279 158 aaKnown RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 TRA2AQ13595 282 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 FNBP1LQ5T0N5 605 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 PHF19Q5T6S3 580 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 NKAIN2Q5VXU1 208 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 ZNF574Q6ZN55 896 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 LRRC69Q6ZNQ3 347 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 PRELID2Q8N945 189 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 SGF29Q96ES7 293 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 DCUN1D1Q96GG9 259 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 NAP1L3Q99457 506 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 CMKLR1Q99788 373 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 NUDT22Q9BRQ3 303 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 SEMA6CQ9H3T2 930 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 EPB41L1Q9H4G0 881 aa18.31■□□□□ 0.52
CCDC188-202ENST00000444532 SCHIP1Q9P0W5 487 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 TTC7AQ9ULT0 858 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-202ENST00000444532 DSPP15924 2871 aaKnown RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 TRBV5-4A0A0C4DH59 114 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 HEATR9A2RTY3 570 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 CDRT15L2A8MXV6 281 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 CFAP99D6REC4 459 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 CCL22O00626 93 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 DUX1O43812 170 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 TNFSF15O95150 251 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 VIPP01282 170 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 ITGA2BP08514 1039 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 RPL10P27635 214 aaKnown RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 SLC19A1P41440 591 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 HALP42357 657 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 KCNJ1P48048 391 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 PCBP4P57723 403 aaKnown RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 BCL7AQ4VC05 210 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 TMEM71Q6P5X7 295 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 WDR74Q6RFH5 385 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 ZNF761Q86XN6 746 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 TRIM48Q8IWZ4 208 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 ZNF248Q8NDW4 579 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 DCBLD2Q96PD2 775 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 RANBP9Q96S59 729 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 COPS8Q99627 209 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 FAM96AQ9H5X1 160 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 CASS4Q9NQ75 786 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 EIF2B3Q9NR50 452 aaKnown RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 ZDHHC3Q9NYG2 299 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 AKAP7Q9P0M2 348 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 ZNF624Q9P2J8 865 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-202ENST00000444532 RIMKLBQ9ULI2 386 aa18.3■□□□□ 0.52
CCDC188-202ENST00000444532 IGLV3-16A0A075B6K0 115 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 IGHV5-10-1A0A0J9YXX1 117 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 PMS2P1A4D2B8 440 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 MGAT4DA6NG13 374 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 LILRA5A6NI73 299 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms