RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 FCRL3Q96P31 734 aaPredicted RBP16.51■□□□□ 0.23
TSPAN9-204ENST00000444315 GORASP1Q9BQQ3 440 aa16.51■□□□□ 0.23
TSPAN9-204ENST00000444315 ASCL3Q9NQ33 180 aa16.51■□□□□ 0.23
TSPAN9-204ENST00000444315 PIH1D1Q9NWS0 290 aaKnown RBP16.51■□□□□ 0.23
TSPAN9-204ENST00000444315 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
TSPAN9-204ENST00000444315 ZNF106Q9H2Y7 1883 aaKnown RBP16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 CHUKO15111 745 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 LIASO43766 372 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 CEP104O60308 925 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 METTL18O95568 372 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 ITIH1P19827 911 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 CD1CP29017 333 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 STIP1P31948 543 aaKnown RBP16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 UCNP55089 124 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 TMPRSS3P57727 454 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 KRT33BQ14525 404 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 PLCL1Q15111 1095 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 KHDC1Q4VXA5 237 aaKnown RBP16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 MEI1Q5TIA1 1274 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 OR4D9Q8NGE8 314 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 SLC35B2Q8TB61 432 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 ZNF514Q96K75 400 aaPredicted RBP16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 FAM96AQ9H5X1 160 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 GRPEL1Q9HAV7 217 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 SLC23A2Q9UGH3 650 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 PPP2R2CQ9Y2T4 447 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 PCDHB11Q9Y5F2 797 aa16.5■□□□□ 0.23
TSPAN9-204ENST00000444315 IGHV5-10-1A0A0J9YXX1 117 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 CCL22O00626 93 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 POP7O75817 140 aaKnown RBP16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 SLC5A2P31639 672 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 MC4RP32245 332 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 FDFT1P37268 417 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 TRA2AQ13595 282 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 GSE1Q14687 1217 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 NR1D2Q14995 579 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 ZNF449Q6P9G9 518 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 SLITRK4Q8IW52 837 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 RASGEF1AQ8N9B8 481 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 AGBL5Q8NDL9 886 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 USP7Q93009 1102 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.49■□□□□ 0.232e-6■■■■■ 36.1
TSPAN9-204ENST00000444315 CRELD1Q96HD1 420 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 DNAJC1Q96KC8 554 aaKnown RBP16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 COPS8Q99627 209 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 TBC1D10AQ9BXI6 508 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 DPH1Q9BZG8 443 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 RAB6BQ9NRW1 208 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 PSMD13Q9UNM6 376 aa16.49■□□□□ 0.23
TSPAN9-204ENST00000444315 A0A1W2PNU3 283 aaPredicted RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 HGSO14964 777 aaPredicted RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 KCNJ13O60928 360 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 RASSF9O75901 435 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 AP2A1O95782 977 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 FGGP02679 453 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 SLC35G4P0C7Q5 338 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 TYRP1P17643 537 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 CSF2RBP32927 897 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 CLCNKAP51800 687 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 LIMK2P53671 638 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 EPHA4P54764 986 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 CCZ1BP86790 482 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 CCZ1P86791 482 aaPredicted RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 ZFP36L1Q07352 338 aaKnown RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 C16orf72Q14CZ0 275 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 TMEM71Q6P5X7 295 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 IGF2-ASQ6U949 168 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 TMPRSS9Q7Z410 1059 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 HEXDCQ8WVB3 486 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 EPB41L1Q9H4G0 881 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 VPS37BQ9H9H4 285 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 POT1Q9NUX5 634 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 IMP3Q9NV31 184 aaKnown RBP16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 SMOXQ9NWM0 555 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 PAK5Q9P286 719 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 TMPRSS11EQ9UL52 423 aa16.48■□□□□ 0.23
TSPAN9-204ENST00000444315 DSPP15924 2871 aaKnown RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 PRAMEF33A0A0G2JMD5 474 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 OR52A4PA6NMU1 304 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 ERI2A8K979 691 aaKnown RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 PRAMEF10O60809 474 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 UBXN7O94888 489 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 HOXB3P14651 431 aaPredicted RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 CXCR5P32302 372 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 ZNF140P52738 457 aaPredicted RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 CTSCP53634 463 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 TLE3Q04726 772 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 CDH17Q12864 832 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 LAMB3Q13751 1172 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 SNX20Q7Z614 316 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 CLEC14AQ86T13 490 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 PLXDC1Q8IUK5 500 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 ZNF547Q8IVP9 402 aa16.47■□□□□ 0.23
TSPAN9-204ENST00000444315 BEND7Q8N7W2 519 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms