RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 LIPCP11150 499 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 LPOP22079 712 aaPredicted RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 LIMK2P53671 638 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 ITGA9Q13797 1035 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 TAF1AQ15573 450 aaPredicted RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 OASLQ15646 514 aaKnown RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 KHDC1Q4VXA5 237 aaKnown RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 LRRTM4Q86VH4 590 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 TRAPPC5Q8IUR0 188 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 SFRP1Q8N474 314 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 SLC37A2Q8TED4 501 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 CCDC74BQ96LY2 380 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 B3GNT4Q9C0J1 378 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 KCNK4Q9NYG8 393 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 FKBPLQ9UIM3 349 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 TMPRSS11EQ9UL52 423 aa13.81□□□□□ -0.2
TREX1-202ENST00000444177 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
TREX1-202ENST00000444177 CEP104O60308 925 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A9O60656 530 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 CDK14O94921 469 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 AP2A1O95782 977 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 FGF3P11487 239 aaPredicted RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A6P19224 532 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A1P22309 533 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A4P22310 534 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 MPSTP25325 297 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A3P35503 534 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 FASLGP48023 281 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 LMAN1P49257 510 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 PPM1FP49593 454 aaPredicted RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 SRSF6Q13247 344 aaKnown RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 TRA2AQ13595 282 aaKnown RBP eCLIP13.8□□□□□ -0.2
TREX1-202ENST00000444177 SEPT6Q14141 434 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 LY6DQ14210 128 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 TMEM164Q5U3C3 297 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 KCTD11Q693B1 232 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 DENND5AQ6IQ26 1287 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 ZNF605Q86T29 641 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 DTX1Q86Y01 620 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 KLHDC8BQ8IXV7 354 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 CCDC89Q8N998 374 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 OR13C4Q8NGS5 318 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 BRSK1Q8TDC3 778 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 DPYSL5Q9BPU6 564 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 STN1Q9H668 368 aaKnown RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A7Q9HAW7 530 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A10Q9HAW8 530 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 UGT1A8Q9HAW9 530 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 PIH1D1Q9NWS0 290 aaKnown RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 FEZ2Q9UHY8 353 aaPredicted RBP13.8□□□□□ -0.2
TREX1-202ENST00000444177 DNAJC16Q9Y2G8 782 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 KCTD3Q9Y597 815 aa13.8□□□□□ -0.2
TREX1-202ENST00000444177 E7EVH7 732 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 GAPDHSO14556 408 aaPredicted RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 CHUKO15111 745 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 KMOO15229 486 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 PSMD3O43242 534 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 FGGP02679 453 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 AKT1P31749 480 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 STIP1P31948 543 aaKnown RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 CXCR5P32302 372 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 CSF2RBP32927 897 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 ZNF140P52738 457 aaPredicted RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 GPLD1P80108 840 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 PDE1BQ01064 536 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 SIX1Q15475 284 aaPredicted RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 SEPT7Q16181 437 aaKnown RBP13.79□□□□□ -0.2
TREX1-202ENST00000444177 LDLRAP1Q5SW96 308 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 GPRC6AQ5T6X5 926 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 TMEM71Q6P5X7 295 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 PRUNE1Q86TP1 453 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 DDHD1Q8NEL9 900 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 DTX3LQ8TDB6 740 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 TAAR9Q96RI9 348 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 TIMM29Q9BSF4 260 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 SEMA4CQ9C0C4 833 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 ARNT2Q9HBZ2 717 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 SMOXQ9NWM0 555 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 TMEM9Q9P0T7 183 aa13.79□□□□□ -0.2
TREX1-202ENST00000444177 PCDHB11Q9Y5F2 797 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms