RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CSF2RBP32927 897 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 GDF10P55107 478 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 OLIG2Q13516 323 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 RPS6KA1Q15418 735 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 LONRF2Q1L5Z9 754 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 MEI1Q5TIA1 1274 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 TMEM164Q5U3C3 297 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 AMZ2Q86W34 360 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 SLC13A5Q86YT5 568 aaPredicted RBP18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 RBM12BQ8IXT5 1001 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 RASGEF1AQ8N9B8 481 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 AGBL5Q8NDL9 886 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 CCDC74BQ96LY2 380 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 ALS2CR12Q96Q35 445 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 POT1Q9NUX5 634 aa18.53■□□□□ 0.56
ATPAF2-201ENST00000444058 CACNA1GO43497 2377 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 ERI2A8K979 691 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 LDB2O43679 373 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 ZNF140P52738 457 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 TMPRSS3P57727 454 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 XIAPP98170 497 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 NFATC2Q13469 925 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 PTPRCAPQ14761 206 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 OASLQ15646 514 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 ZNF761Q86XN6 746 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 SNRNP27Q8WVK2 155 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 CRELD1Q96HD1 420 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 NAF1Q96HR8 494 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 ASB8Q9H765 288 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 SCHIP1Q9P0W5 487 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 ZNF624Q9P2J8 865 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 DNAJC16Q9Y2G8 782 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 PCDHGA3Q9Y5H0 932 aa18.52■□□□□ 0.56
ATPAF2-201ENST00000444058 PDZK1P1A8MUH7 402 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 GPR39O43194 453 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 LIASO43766 372 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 NRDCO43847 1150 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 POP7O75817 140 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 AP2A1O95782 977 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 VIPP01282 170 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 BRAFP15056 766 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 ITIH1P19827 911 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 MSH3P20585 1137 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 CSTF2P33240 577 aaKnown RBP eCLIP18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 SLC19A1P41440 591 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 SPARCL1Q14515 664 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 PLA2G4EQ3MJ16 856 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 TMEM26Q6ZUK4 368 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 GPR155Q7Z3F1 870 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 LINC00523Q86TU6 105 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 JAMLQ86YT9 394 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 RCBTB1Q8NDN9 531 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 HEXDCQ8WVB3 486 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 ULK4Q96C45 1275 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 FCRL3Q96P31 734 aaPredicted RBP18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 FKBPLQ9UIM3 349 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 KCTD3Q9Y597 815 aa18.51■□□□□ 0.55
ATPAF2-201ENST00000444058 NBEAQ8NFP9 2946 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TEX51A0A1B0GUA7 166 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 B4E171 279 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 H7C0S8 307 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 CA5AP35218 305 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TSPAN7P41732 249 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 HALP42357 657 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 CTSCP53634 463 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 CLN3Q13286 438 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 GPR33Q49SQ1 333 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TMEM220Q6QAJ8 160 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 ARHGAP22Q7Z5H3 698 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 SNX20Q7Z614 316 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 PLXDC1Q8IUK5 500 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TRIM48Q8IWZ4 208 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TRIM58Q8NG06 486 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 OR13C4Q8NGS5 318 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 ATG4AQ8WYN0 398 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 USP7Q93009 1102 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 LINC00615Q96LM1 132 aaPredicted RBP18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 TAAR9Q96RI9 348 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 SLC40A1Q9NP59 571 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 LZTFL1Q9NQ48 299 aa18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.5■□□□□ 0.55
ATPAF2-201ENST00000444058 AHCTF1Q8WYP5 2266 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 IGSF10Q6WRI0 2623 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 PRAMEF33A0A0G2JMD5 474 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 PRAMEF10O60809 474 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 LIPCP11150 499 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 RALBP11234 206 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 CCL4P13236 92 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 ITGALP20701 1170 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 PSMA3P25788 255 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 RPL10P27635 214 aaKnown RBP18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 AKT1P31749 480 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 ETV5P41161 510 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 CCZ1BP86790 482 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 CCZ1P86791 482 aaPredicted RBP18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 BCL7AQ4VC05 210 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 METRNLQ641Q3 311 aa18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 DRICH1Q6PGQ1 229 aaPredicted RBP18.49■□□□□ 0.55
ATPAF2-201ENST00000444058 BEND7Q8N7W2 519 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms