RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 S100BP04271 92 aaPredicted RBP20.09■□□□□ 0.81
SHOX2-203ENST00000441443 HLA-DQB2P05538 268 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 CHRNB3Q05901 458 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 SOX4Q06945 474 aaPredicted RBP20.09■□□□□ 0.81
SHOX2-203ENST00000441443 ILF2Q12905 390 aaKnown RBP20.09■□□□□ 0.81
SHOX2-203ENST00000441443 COQ5Q5HYK3 327 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 SPESP1Q6UW49 350 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 PLEKHH3Q7Z736 793 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 TMEM199Q8N511 208 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 PIK3C3Q8NEB9 887 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 OR13J1Q8NGT2 312 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 RNF34Q969K3 372 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 ZFP42Q96MM3 310 aa20.09■□□□□ 0.81
SHOX2-203ENST00000441443 MARCH4Q9P2E8 410 aaPredicted RBP20.09■□□□□ 0.81
SHOX2-203ENST00000441443 SMIM28A0A1B0GU29 152 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 EEDO75530 441 aaKnown RBP20.08■□□□□ 0.81
SHOX2-203ENST00000441443 SLC22A3O75751 556 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 SEC24AO95486 1093 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 CHRNA1P02708 482 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 RAP2AP10114 183 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 IL12AP29459 219 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 CXCR3P49682 368 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 POLR2JP52435 117 aaKnown RBP20.08■□□□□ 0.81
SHOX2-203ENST00000441443 FRS2Q8WU20 508 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 DACH2Q96NX9 599 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 TP63Q9H3D4 680 aaPredicted RBP20.08■□□□□ 0.81
SHOX2-203ENST00000441443 FBXO8Q9NRD0 319 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 RBM22Q9NW64 420 aaKnown RBP eCLIP20.08■□□□□ 0.81
SHOX2-203ENST00000441443 LEF1Q9UJU2 399 aaPredicted RBP20.08■□□□□ 0.81
SHOX2-203ENST00000441443 INVSQ9Y283 1065 aa20.08■□□□□ 0.81
SHOX2-203ENST00000441443 CD40LGP29965 261 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 PRDX3P30048 256 aaKnown RBP20.08■□□□□ 0.8
SHOX2-203ENST00000441443 FAM98BQ52LJ0 330 aaKnown RBP20.08■□□□□ 0.8
SHOX2-203ENST00000441443 ENPP6Q6UWR7 440 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 CILP2Q8IUL8 1156 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 TNIP3Q96KP6 325 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 LRRC3Q9BY71 257 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 HOXD1Q9GZZ0 328 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 ENTPD7Q9NQZ7 604 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 TIMM13Q9Y5L4 95 aaPredicted RBP20.08■□□□□ 0.8
SHOX2-203ENST00000441443 TRIP12Q14669 1992 aaPredicted RBP20.08■□□□□ 0.8
SHOX2-203ENST00000441443 GNGT2O14610 69 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 HS6ST1O60243 411 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 GPR32O75388 356 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 BMPR1AP36894 532 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 GEMP55040 296 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 GABARAPL2P60520 117 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 SLC14A2Q15849 920 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 SPATS1Q496A3 300 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 TWF2Q6IBS0 349 aaKnown RBP20.08■□□□□ 0.8
SHOX2-203ENST00000441443 ERVK-18Q9QC07 812 aa20.08■□□□□ 0.8
SHOX2-203ENST00000441443 COL1A2P08123 1366 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 DICER1Q9UPY3 1922 aaKnown RBP20.07■□□□□ 0.8
SHOX2-203ENST00000441443 SLC22A1O15245 554 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 PRSS23O95084 383 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 CST1P01037 141 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 DARSP14868 501 aaKnown RBP20.07■□□□□ 0.8
SHOX2-203ENST00000441443 CD1DP15813 335 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 ARSDP51689 593 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 ISL1P61371 349 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 EMX2Q04743 252 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 RANBP10Q6VN20 620 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 RAB44Q7Z6P3 723 aaPredicted RBP20.07■□□□□ 0.8
SHOX2-203ENST00000441443 FIG4Q92562 907 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 RORBQ92753 470 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 ACOX2Q99424 681 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 PTPN18Q99952 460 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 RGS18Q9NS28 235 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 SNPHO15079 494 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 MTHFD2P13995 350 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 SERPINB10P48595 397 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 NKG7Q16617 165 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 CCL14Q16627 93 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 LRIT3Q3SXY7 679 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 TXNDC11Q6PKC3 985 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 DCBLD1Q8N8Z6 715 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 TRIB2Q92519 343 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 RPL3LQ92901 407 aaKnown RBP20.07■□□□□ 0.8
SHOX2-203ENST00000441443 TSGA13Q96PP4 275 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 OSBPL10Q9BXB5 764 aa20.07■□□□□ 0.8
SHOX2-203ENST00000441443 THG1LQ9NWX6 298 aaKnown RBP20.07■□□□□ 0.8
SHOX2-203ENST00000441443 LOC100130705A0A1B0GUX0 176 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 TTC34A8MYJ7 566 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 DLGAP3O95886 979 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 AIF1P55008 147 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 DAOAP59103 153 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 GPR162Q16538 588 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 CLPPQ16740 277 aaPredicted RBP20.06■□□□□ 0.8
SHOX2-203ENST00000441443 TLK2Q86UE8 772 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 CALML6Q8TD86 181 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 MCOLN3Q8TDD5 553 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 NDFIP2Q9NV92 336 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 AIG1Q9NVV5 245 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 MAGEL2Q9UJ55 1249 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 U3KQV3 271 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 MEIS3P2A8K0S8 358 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 EIF2S1P05198 315 aaKnown RBP20.06■□□□□ 0.8
SHOX2-203ENST00000441443 ENO2P09104 434 aaPredicted RBP20.06■□□□□ 0.8
SHOX2-203ENST00000441443 PSMB9P28065 219 aa20.06■□□□□ 0.8
SHOX2-203ENST00000441443 ALDH7A1P49419 539 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms