RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CRHR2Q13324 411 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 CDK10Q15131 360 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 TP53INP2Q8IXH6 220 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 HS3ST5Q8IZT8 346 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 BIRC7Q96CA5 298 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 LRRC58Q96CX6 371 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 TMEM74Q96NL1 305 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 TBCBQ99426 244 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 MED10Q9BTT4 135 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 SLIRPQ9GZT3 109 aaKnown RBP16.64■□□□□ 0.26
PMS1-213ENST00000441310 LRRC4Q9HBW1 653 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 PAQR5Q9NXK6 330 aaPredicted RBP16.64■□□□□ 0.26
PMS1-213ENST00000441310 KLHL8Q9P2G9 620 aaPredicted RBP16.64■□□□□ 0.26
PMS1-213ENST00000441310 EVLQ9UI08 416 aaPredicted RBP16.64■□□□□ 0.26
PMS1-213ENST00000441310 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.26
PMS1-213ENST00000441310 PTGESO14684 152 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 MDM4O15151 490 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 CD4P01730 458 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ARNTP27540 789 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 IL12AP29459 219 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 LIPEQ05469 1076 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 UGT3A2Q3SY77 523 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 AGAP6Q5VW22 663 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 LINC00299Q6ZSB3 139 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 SVOPQ8N4V2 548 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 OR6F1Q8NGZ6 308 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 HSFY1Q96LI6 401 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 AGAP4Q96P64 663 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 REXO4Q9GZR2 422 aaKnown RBP16.64■□□□□ 0.25
PMS1-213ENST00000441310 FAM118AQ9NWS6 357 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 HAS3O00219 553 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 SLC1A7O00341 560 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ALPLP05186 524 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 DDX5P17844 614 aaKnown RBP16.64■□□□□ 0.25
PMS1-213ENST00000441310 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
PMS1-213ENST00000441310 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
PMS1-213ENST00000441310 CTBP1Q13363 440 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 SELPLGQ14242 412 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 C17orf99Q6UX52 265 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ZNF555Q8NEP9 628 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ELMO2Q96JJ3 720 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 PAAF1Q9BRP4 392 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 NTN4Q9HB63 628 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 NECTIN3Q9NQS3 549 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 CHST12Q9NRB3 414 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ZNF639Q9UID6 485 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 DERAQ9Y315 318 aa16.64■□□□□ 0.25
PMS1-213ENST00000441310 ERVH48-1M5A8F1 160 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CDK2AP1O14519 115 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 AREL1O15033 823 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 PRMT9Q6P2P2 845 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 TXNDC11Q6PKC3 985 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 GDPD3Q7L5L3 318 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 METTL4Q8N3J2 472 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 HEXDCQ8WVB3 486 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 SNX18Q96RF0 628 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CLPBQ9H078 707 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CCDC177Q9NQR7 707 aaPredicted RBP16.63■□□□□ 0.25
PMS1-213ENST00000441310 AASSQ9UDR5 926 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 DSEQ9UL01 958 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 ST3GAL5Q9UNP4 418 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 ITGB6P18564 788 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 BCAT1P54687 386 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CDC42EP1Q00587 391 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 CSHL1Q14406 222 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 TTC23Q5W5X9 447 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 OTOP3Q7RTS5 596 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 DENND6AQ8IWF6 608 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 ABI1Q8IZP0 508 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 DEFB106AQ8N104 65 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 MINDY1Q8N5J2 469 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 HASPINQ8TF76 798 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 GPR78Q96P69 363 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 RHOJQ9H4E5 214 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 MIOSQ9NXC5 875 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
PMS1-213ENST00000441310 MAGEB16A2A368 324 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 AP3D1O14617 1153 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 AHSGP02765 367 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 ATP5F1P24539 256 aaPredicted RBP16.62■□□□□ 0.25
PMS1-213ENST00000441310 MAP3K7CLP57077 242 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 OR2B6P58173 313 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 TUBA1BP68363 451 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 PPP2R2BQ00005 443 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 NFYCQ13952 458 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 LAIR2Q6ISS4 152 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 TUBA1AQ71U36 451 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 CNIH3Q8TBE1 160 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 AMBRA1Q9C0C7 1298 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 ERVK-18Q9QC07 812 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 GABRQQ9UN88 632 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 MRPL42Q9Y6G3 142 aaKnown RBP16.62■□□□□ 0.25
PMS1-213ENST00000441310 EVPLLA8MZ36 301 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 H3BMM5 538 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 ZNF181Q2M3W8 571 aa16.62■□□□□ 0.25
PMS1-213ENST00000441310 CCSAPQ6IQ19 270 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms