RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 CTF1Q16619 201 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 KYAT1Q16773 422 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 LGI2Q8N0V4 545 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 FOXJ1Q92949 421 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PIP5K1AQ99755 562 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 MECRQ9BV79 373 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 POLR3BQ9NW08 1133 aaPredicted RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PAK1IP1Q9NWT1 392 aaPredicted RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 MRPS7Q9Y2R9 242 aaKnown RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PMM2O15305 246 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 APOC1P02654 83 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 RPLP2P05387 115 aaKnown RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 SYN1P17600 705 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 KELP23276 732 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PBX3P40426 434 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 ZBTB6Q15916 424 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 ANKRD39Q53RE8 183 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 ZNF667Q5HYK9 610 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 BRAT1Q6PJG6 821 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 GDPD3Q7L5L3 318 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 OR8K5Q8NH50 307 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 BLOC1S5Q8TDH9 187 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 C20orf27Q9GZN8 174 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 LHX5Q9H2C1 402 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 PRKAG2Q9UGJ0 569 aa13.76□□□□□ -0.21
LINC01271-201ENST00000441214 WARS2Q9UGM6 360 aaKnown RBP13.76□□□□□ -0.21
LINC01271-201ENST00000441214 C9IYK1 514 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 F8W036 122 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TOR1BO14657 336 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 AIM2O14862 343 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SYNCRIPO60506 623 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CAPGP40121 348 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PSMD8P48556 350 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TPMTP51580 245 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PTP4A2Q12974 167 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SEMA3BQ13214 749 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PPP1R26Q5T8A7 1209 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 RETSATQ6NUM9 610 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 DRICH1Q6PGQ1 229 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SLC24A5Q71RS6 500 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 OR2T34Q8NGX1 318 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SHC3Q92529 594 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 UFD1Q92890 307 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SORT1Q99523 831 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 NIF3L1Q9GZT8 377 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ZNF395Q9H8N7 513 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 RGS18Q9NS28 235 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CHORDC1Q9UHD1 332 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TDRD15B5MCY1 1934 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 DCXO43602 365 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CPNE3O75131 537 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PPM1BO75688 479 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ZMPSTE24O75844 475 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 GABARAPO95166 117 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SNX4O95219 450 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 THP07101 528 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 INHBAP08476 426 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 HOXC13P31276 330 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 RPP38P78345 283 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 GAD2Q05329 585 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TNK1Q13470 666 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PEX6Q13608 980 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 HIF1AQ16665 826 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PARP15Q460N3 678 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 TTC39BQ5VTQ0 682 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ALKBH2Q6NS38 261 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 METTL4Q8N3J2 472 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 ZNF564Q8TBZ8 553 aaPredicted RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 VWCEQ96DN2 955 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 CNDP1Q96KN2 507 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 C9orf16Q9BUW7 83 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 MRM3Q9HC36 420 aaKnown RBP13.75□□□□□ -0.21
LINC01271-201ENST00000441214 SNX15Q9NRS6 342 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 COQ3Q9NZJ6 369 aa13.75□□□□□ -0.21
LINC01271-201ENST00000441214 REV1Q9UBZ9 1251 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms