RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ATP6V1G3Q96LB4 118 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 JPH2Q9BR39 696 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRIM51Q9BSJ1 452 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 RTKNQ9BST9 563 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TCHPQ9BT92 498 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PI4K2AQ9BTU6 479 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 CAPS2Q9BXY5 557 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TWSG1Q9GZX9 223 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 C2orf40Q9H1Z8 148 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MROH8Q9H579 483 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMBIM4Q9HC24 238 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 MRPL47Q9HD33 250 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERVK-5Q9HDB9 667 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 RBAKQ9NYW8 714 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DKK4Q9UBT3 224 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCYOX1Q9UHG3 505 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 POLG2Q9UHN1 485 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 AGTPBP1Q9UPW5 1226 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SNX24Q9Y343 169 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCDHB2Q9Y5E7 798 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 SSC5DA1L4H1 1573 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 FER1L6Q2WGJ9 1857 aa3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 RBBP6Q7Z6E9 1792 aaKnown RBP3.53□□□□□ -1.84
HMGB3P11-201ENST00000440127 DOCK1Q14185 1865 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MROH7Q68CQ1 1323 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PASKQ96RG2 1323 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNTNAP2Q9UHC6 1331 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 IGKV6-21A0A0C4DH24 114 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TCRBV5S1A1TA0A578 114 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM170AA1A519 330 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A10PA6NDY2 464 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR2W5A6NFC9 320 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 HMX3A6NHT5 357 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASB14A6NK59 587 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 H0YGN5 161 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 H7C4K7 107 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 RAB27BO00194 218 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 OGTO15294 1046 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 EIF3HO15372 352 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASAP2O43150 1006 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 HBP1O60381 514 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TOM1L1O75674 476 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PROSCO94903 275 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CALCAP01258 141 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT14P02533 472 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TNNC2P02585 160 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TK1P04183 234 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CALB1P05937 261 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PGK2P07205 417 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CD63P08962 238 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 RRM1P23921 792 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ADRA1DP25100 572 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 RBL1P28749 1068 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC5A2P31639 672 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 COILP38432 576 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CETN2P41208 172 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MARCKSL1P49006 195 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FNTAP49354 379 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 DIO1P49895 249 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC26A2P50443 739 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PAPOLAP51003 745 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PMS2P54278 862 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 EIF3BP55884 814 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 POLE2P56282 527 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 YWHAEP62258 255 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 AP2B1P63010 937 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 VAMP2P63027 116 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 GNGT1P63211 74 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 NOP14P78316 857 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CFHR3Q02985 330 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 NSUN2Q08J23 767 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 IFFO1Q0D2I5 559 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 LAMTOR4Q0VGL1 99 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTP4A2Q12974 167 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PPIL2Q13356 520 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRPC3Q13507 836 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FHL1Q13642 323 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CAPSQ13938 189 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TFDP1Q14186 410 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PLCB4Q15147 1175 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 UAP1Q16222 522 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAPK6Q16659 721 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 LY6KQ17RY6 165 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SGSM1Q2NKQ1 1148 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF260Q3ZCT1 412 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CELF3Q5SZQ8 465 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCTD16Q68DU8 428 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SPOPLQ6IQ16 392 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MRNIPQ6NTE8 343 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 AADACL2Q6P093 401 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMEM270Q6UE05 265 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 RANBP10Q6VN20 620 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 DSTYKQ6XUX3 929 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 USP50Q70EL3 339 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARMC9Q7Z3E5 817 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TECPR1Q7Z6L1 1165 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CROCCP2Q86T23 111 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms